Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | B2K12_RS05180 | Genome accession | NZ_CP019965 |
| Coordinates | 1007401..1007703 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain NCTC12662 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1002401..1012703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B2K12_RS05155 (B2K12_05155) | rpsR | 1002763..1003023 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| B2K12_RS05160 (B2K12_05160) | lon | 1003084..1005459 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| B2K12_RS05165 (B2K12_05165) | - | 1005476..1006123 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| B2K12_RS05170 (B2K12_05170) | fliW | 1006284..1006673 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| B2K12_RS05175 (B2K12_05175) | proC | 1006673..1007404 (+) | 732 | WP_044306077.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| B2K12_RS05180 (B2K12_05180) | ctsT | 1007401..1007703 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| B2K12_RS05185 (B2K12_05185) | - | 1007700..1008362 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| B2K12_RS05190 (B2K12_05190) | - | 1008359..1008811 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| B2K12_RS05195 (B2K12_05195) | hemD | 1008808..1009437 (-) | 630 | WP_044306078.1 | uroporphyrinogen-III synthase | - |
| B2K12_RS05200 (B2K12_05200) | thiE | 1009415..1010047 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| B2K12_RS05205 (B2K12_05205) | thiD | 1010037..1010849 (-) | 813 | WP_044306378.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| B2K12_RS05210 (B2K12_05210) | - | 1010846..1011532 (-) | 687 | WP_044306079.1 | 3-methyladenine DNA glycosylase | - |
| B2K12_RS05215 (B2K12_05215) | - | 1011529..1012290 (-) | 762 | WP_044306080.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=219270 B2K12_RS05180 WP_002855822.1 1007401..1007703(+) (ctsT) [Campylobacter jejuni strain NCTC12662]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=219270 B2K12_RS05180 WP_002855822.1 1007401..1007703(+) (ctsT) [Campylobacter jejuni strain NCTC12662]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACAATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACAATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |