Detailed information NTG0219183

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: A9237_RS06955
• Genome accession: NZ_CP019959
• Coordinates: 1551893..1552900 (+)
• Length: 335 a.a.
• NCBI ID: WP_009707836.1
• Uniprot ID: A0AAP9GE11
• Organism: Vibrio owensii strain XSBZ03
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1546893..1557900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9237_RS06930 (A9237_06930)	rplD	1546947..1547549 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
A9237_RS06935 (A9237_06935)	rplC	1547567..1548196 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
A9237_RS06940 (A9237_06940)	rpsJ	1548211..1548522 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
A9237_RS06945 (A9237_06945)	rpmE	1548968..1549189 (-)	222	WP_005435070.1	50S ribosomal protein L31	-
A9237_RS06950 (A9237_06950)	priA	1549485..1551686 (+)	2202	WP_078607905.1	primosomal protein N'	-
A9237_RS06955 (A9237_06955)	cytR	1551893..1552900 (+)	1008	WP_009707836.1	DNA-binding transcriptional regulator CytR	Regulator
A9237_RS06960 (A9237_06960)	-	1553052..1553603 (+)	552	WP_020196517.1	SPOR domain-containing protein	-
A9237_RS06965 (A9237_06965)	hslV	1553893..1554444 (+)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
A9237_RS06970 (A9237_06970)	hslU	1554474..1555805 (+)	1332	WP_009707838.1	HslU--HslV peptidase ATPase subunit	-
A9237_RS06975 (A9237_06975)	-	1556445..1557362 (+)	918	WP_078607906.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36959.54 Da
• Isoelectric Point: 5.9796

>NTDB_id=219183 A9237_RS06955 WP_009707836.1 1551893..1552900(+) (cytR) [Vibrio owensii strain XSBZ03]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGINKEEQYSVIADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=219183 A9237_RS06955 WP_009707836.1 1551893..1552900(+) (cytR) [Vibrio owensii strain XSBZ03]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTGATGAATCCAGAAAA
AGTCTCTTCATCGACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAGACCATTGTCACTATCGTCCCAGACATTTGCGACCCGTACTTCTCTGAGATTATTCGCGGC
ATTGAAGACGCAGCAATGGAACACGGCTACCTTGTTCTACTTGGTGATAGCGGTCAGCAGAAAAAGCGTGAAAGCTCATT
TGTAAACTTGGTTTTCACCAAGCAAGCTGATGGCATGCTGCTTCTCGGAACCGACCTGCCTTTTGATGTCAGCAAACCGG
AACAGAAAAACCTACCACCTATGGTGATGGCGTGTGAGTTCGCACCAGAACTTGAATTGCCAACGGTACACATTGATAAC
CTTACTTCTGCGTTCGAGGCTGTAAATTACCTGACTCAACTTGGCCATAAGCGTATTGCTCAAATCTCTGGCCCAGACAC
TGCGGTACTTTGTCAGTTCCGCCAACAGGGTTACCAGCAAGCACTTCGTCGCGCAGGCATTAATAAAGAAGAACAATATA
GCGTAATCGCTGACTTCTCTTTTGAAGGCGGCGTGCAAGCAGTCCGTAAACTCCTTGAATTACCGGAACCGCCAACCGCA
CTCTTCTGCCACTGTGACACCATGGCGATTGGTGCGATTCAAGAAGCGAAACGTTTAGGTTTACGTATTCCTCAAGATTT
ATCGATCGTGGGCTTTGATGACATTCAGTTCGCACAATACTGCGATCCACCGTTAACGACTATCTCCCAACCTCGTTATG
AGATCGGTCGTCAAGCAATGTTGATGATGCTTGAACTATTGAAAGGCCATGACGTTCATTCCGGCTCTCGCTTGCTAGAG
ACTAAGTTAGTTGTTCGTGGCAGCGCTGCGCCACCGCCATTGCGTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.361	99.104	0.896