Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   A7U46_RS10250 Genome accession   NZ_CP025495
Coordinates   1993068..1993538 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain 3020.C01     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1988068..1998538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7U46_RS10215 (A7U46_010215) - 1988108..1988521 (+) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -
  A7U46_RS10220 (A7U46_010220) - 1988721..1989164 (+) 444 WP_000070866.1 Dps family protein -
  A7U46_RS10225 (A7U46_010225) deoD 1989285..1989995 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  A7U46_RS10230 (A7U46_010230) deoC 1990310..1990972 (+) 663 WP_001083316.1 deoxyribose-phosphate aldolase -
  A7U46_RS10240 (A7U46_010240) - 1991251..1992552 (+) 1302 WP_001242318.1 pyrimidine-nucleoside phosphorylase -
  A7U46_RS10245 (A7U46_010245) - 1992566..1992916 (+) 351 WP_001024035.1 membrane protein -
  A7U46_RS10250 (A7U46_010250) luxS 1993068..1993538 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  A7U46_RS10255 (A7U46_010255) - 1993849..1995033 (+) 1185 WP_001291500.1 M20 family metallopeptidase -
  A7U46_RS10260 (A7U46_010260) ldmS 1995033..1996226 (+) 1194 WP_000183726.1 L-aspartate--L-methionine ligase LdmS -
  A7U46_RS10265 (A7U46_010265) - 1996625..1997296 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  A7U46_RS10270 (A7U46_010270) coaW 1997426..1998229 (-) 804 WP_000862727.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=219099 A7U46_RS10250 WP_000164421.1 1993068..1993538(-) (luxS) [Staphylococcus aureus strain 3020.C01]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=219099 A7U46_RS10250 WP_000164421.1 1993068..1993538(-) (luxS) [Staphylococcus aureus strain 3020.C01]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404