Detailed information NTG0218983

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SPSF3K_RS08145
• Genome accession: NZ_CP025420
• Coordinates: 1604069..1606276 (-)
• Length: 735 a.a.
• NCBI ID: WP_003108256.1
• Uniprot ID: A0ABN0IRU9
• Organism: Streptococcus parauberis strain SPOF3K
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1599069..1611276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPSF3K_RS08115 (SPSF3K_01645)	-	1599691..1600479 (-)	789	WP_003107147.1	Nif3-like dinuclear metal center hexameric protein	-
SPSF3K_RS08120 (SPSF3K_01646)	-	1600469..1601152 (-)	684	WP_013794081.1	tRNA (adenine(22)-N(1))-methyltransferase	-
SPSF3K_RS08125 (SPSF3K_01647)	-	1601248..1601892 (-)	645	WP_037619534.1	CPBP family intramembrane glutamic endopeptidase	-
SPSF3K_RS08130 (SPSF3K_01648)	nth	1602027..1602674 (-)	648	WP_003105062.1	endonuclease III	-
SPSF3K_RS08135 (SPSF3K_01649)	-	1602671..1603351 (-)	681	WP_003103839.1	DnaD domain-containing protein	-
SPSF3K_RS08140 (SPSF3K_01650)	-	1603416..1603934 (-)	519	WP_003107150.1	adenine phosphoribosyltransferase	-
SPSF3K_RS08145 (SPSF3K_01651)	recJ	1604069..1606276 (-)	2208	WP_003108256.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SPSF3K_RS08150 (SPSF3K_01652)	-	1606273..1607037 (-)	765	WP_003108254.1	SDR family NAD(P)-dependent oxidoreductase	-
SPSF3K_RS08155 (SPSF3K_01653)	rnz	1607037..1607966 (-)	930	WP_003108253.1	ribonuclease Z	-
SPSF3K_RS08160 (SPSF3K_01654)	-	1607981..1608625 (-)	645	WP_003105761.1	hypothetical protein	-
SPSF3K_RS08165 (SPSF3K_01655)	hflX	1608618..1609856 (-)	1239	WP_100190758.1	GTPase HflX	-
SPSF3K_RS08170 (SPSF3K_01656)	miaA	1609944..1610834 (-)	891	WP_003108250.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SPSF3K_RS08175 (SPSF3K_01657)	-	1610968..1611144 (+)	177	WP_003103674.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82511.98 Da
• Isoelectric Point: 4.5163

>NTDB_id=218983 SPSF3K_RS08145 WP_003108256.1 1604069..1606276(-) (recJ) [Streptococcus parauberis strain SPOF3K]
MIRAKYDWIINEKKPDDGFFKLAKKKSLSQDICRLLYDRGIHDEKKLDHFLRADLSDLNDPYLLNDMDKAVNRIRTAIEN
FEQILVYGDYDADGMTSASIMKETLEMMGAEALIYLPNRFTDGYGPNESVYKYFIEQNQVSLIITVDNGVAGHEAIAYAQ
AAGVDVIVTDHHSLPDQLPQAYAVIHPEHPDADYPFKKLAGCGVAFKLACALLETVPTEFLDLVAIGTIADMVSLTDENR
VLVKNGLKVLKMSERQGLQELMTISGVDLDAIDEDTVGFKIAPQLNALGRLDDPNPAIELLTGFDDEEAHDIALMINEKN
EERKSLVQTIYNEAVEMVDLSKPVQVLAKAGWHPGVLGIVAGRILEEISQTVIVLNIENGVAKGSARSIEAINIFDALNH
QRELMTAFGGHSGAAGMTLPAENIQALSDSITDYVVSEKIDTSQKNSLKIDSWLDLDHLSLEFLKELNILAPFGMDNKKP
VFALKDFTVVQARTMGADQSHLKLRIKNGSVETDVVAFNQGQYHLEYSQLADLELAVTLTVNSWNGNTSLQLMLVDARAT
KSPQLFDFRARNMTLPNDISDIMVENDGQEVAIIDLPEDLEALRQQFQKRHFEAIYFKNNIDKPYYLSGSGSKDQFARLY
KTIYQFPEFDVRFKLSQLSDYLKIEKYLLVKMIQIFNELGFVAIDNGLMTVNKDASKRDIADSKTYQELQKLVKYQELMS
LGTPQEIYDFLVNED

Nucleotide

• Length: 2208 bp

>NTDB_id=218983 SPSF3K_RS08145 WP_003108256.1 1604069..1606276(-) (recJ) [Streptococcus parauberis strain SPOF3K]
ATGATAAGAGCCAAATATGATTGGATTATAAATGAAAAGAAGCCAGATGATGGCTTCTTTAAACTAGCAAAGAAAAAAAG
TCTTAGTCAAGACATATGTCGGCTCCTTTATGATAGAGGAATTCATGATGAAAAAAAATTAGACCATTTTCTTCGGGCCG
ACCTTTCTGACTTAAACGATCCCTATTTATTAAATGATATGGACAAAGCGGTGAACAGAATTCGGACCGCCATTGAAAAC
TTTGAACAGATTTTAGTTTATGGAGATTATGATGCTGATGGGATGACATCGGCATCCATCATGAAAGAAACACTTGAAAT
GATGGGAGCTGAGGCTTTAATCTACCTCCCCAACCGTTTTACAGATGGTTATGGTCCAAATGAAAGCGTCTATAAGTATT
TCATTGAGCAAAACCAAGTTAGTTTAATTATTACAGTTGATAATGGGGTTGCGGGTCACGAGGCCATTGCTTACGCGCAA
GCAGCAGGTGTTGATGTGATTGTCACGGACCATCACTCTTTACCTGATCAATTACCACAAGCTTACGCAGTTATTCACCC
AGAACATCCAGATGCTGACTATCCTTTTAAAAAATTAGCCGGCTGTGGCGTTGCTTTTAAACTGGCCTGCGCCCTGCTAG
AAACAGTTCCAACTGAATTTCTGGATTTAGTGGCTATTGGTACTATTGCGGATATGGTTTCCTTAACGGATGAAAATCGC
GTTTTAGTAAAGAATGGCTTGAAAGTCCTAAAAATGAGTGAACGGCAAGGTTTACAAGAATTAATGACTATTTCAGGAGT
TGATTTAGACGCTATTGATGAGGATACTGTTGGTTTTAAAATTGCCCCGCAATTAAATGCTCTAGGTCGCTTAGATGATC
CTAATCCAGCAATTGAACTCTTGACTGGATTTGATGATGAAGAAGCCCATGACATTGCCCTCATGATTAATGAAAAAAAC
GAAGAGCGTAAAAGCTTGGTTCAAACTATTTATAATGAAGCTGTTGAGATGGTTGACTTAAGTAAACCAGTTCAAGTTCT
GGCTAAGGCCGGCTGGCATCCTGGTGTACTTGGGATTGTTGCTGGGAGAATTCTTGAAGAAATCAGTCAAACAGTTATCG
TCTTGAATATTGAAAATGGGGTTGCTAAAGGCTCTGCTCGCTCAATAGAGGCTATTAATATATTTGATGCCTTAAATCAT
CAACGAGAATTGATGACTGCTTTTGGTGGTCACAGTGGTGCAGCTGGGATGACCTTACCAGCTGAAAATATTCAAGCTTT
ATCAGATTCCATAACTGATTACGTTGTCTCTGAAAAGATTGATACAAGTCAAAAAAATAGTTTAAAAATTGATAGTTGGT
TAGATCTTGATCACTTGAGTTTGGAATTCTTGAAAGAATTGAATATCTTAGCTCCATTTGGCATGGACAATAAAAAACCT
GTTTTTGCTCTCAAAGATTTCACAGTTGTTCAAGCACGGACTATGGGTGCTGATCAAAGTCACTTGAAGCTCCGGATAAA
AAATGGTTCAGTTGAAACTGATGTTGTTGCCTTTAATCAAGGACAATATCATTTAGAATATAGTCAACTGGCTGATTTAG
AATTGGCCGTGACTTTGACAGTTAATTCTTGGAATGGAAACACCAGTCTTCAGCTTATGTTAGTCGATGCCAGGGCTACC
AAAAGTCCGCAATTATTTGATTTCAGGGCTAGAAATATGACTTTGCCGAATGATATTTCAGATATCATGGTGGAAAATGA
TGGTCAGGAAGTAGCTATTATTGATTTGCCAGAGGATTTGGAGGCTTTGCGCCAGCAATTCCAAAAGAGACATTTTGAAG
CTATTTACTTCAAAAATAATATTGATAAGCCTTATTATCTTTCCGGTTCTGGTAGTAAGGATCAGTTTGCAAGATTATAT
AAAACGATTTACCAATTTCCGGAATTTGATGTTCGTTTTAAATTAAGTCAGTTAAGTGATTACTTGAAAATTGAAAAATA
TCTTTTAGTTAAAATGATTCAAATTTTTAATGAATTAGGTTTTGTTGCAATTGATAATGGTTTAATGACGGTTAATAAGG
ATGCATCAAAACGTGACATCGCGGATAGTAAAACTTATCAAGAATTACAAAAACTAGTTAAGTATCAAGAGCTAATGTCA
CTTGGAACACCGCAAGAAATTTATGATTTTTTGGTTAATGAAGATTAA

Domains

Predicted by InterProScan.

• RecJ OB domain (RecJ_OB) (450-556)

• DHHA1 domain (DHHA1) (317-433)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (585-727)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	62.618	100	0.631
recJ	Bacillus subtilis subsp. subtilis str. 168	36.352	100	0.382