Detailed information    

insolico Bioinformatically predicted

Overview


Name   yaaT   Type   Regulator
Locus tag   SPSF3K_RS03645 Genome accession   NZ_CP025420
Coordinates   730811..731611 (+) Length   266 a.a.
NCBI ID   WP_003104246.1    Uniprot ID   A0ABN0IUJ8
Organism   Streptococcus parauberis strain SPOF3K     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context


Location: 725811..736611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPSF3K_RS03615 (SPSF3K_00740) - 726034..726987 (+) 954 WP_003106246.1 branched-chain amino acid ABC transporter permease -
  SPSF3K_RS03620 (SPSF3K_00741) - 726988..727752 (+) 765 WP_003103139.1 ABC transporter ATP-binding protein -
  SPSF3K_RS03625 (SPSF3K_00742) - 727752..728462 (+) 711 WP_037619731.1 ABC transporter ATP-binding protein -
  SPSF3K_RS03630 (SPSF3K_00743) - 728544..729206 (+) 663 WP_004234723.1 CBS domain-containing protein -
  SPSF3K_RS03635 (SPSF3K_00744) tmk 729270..729926 (+) 657 WP_003105765.1 dTMP kinase -
  SPSF3K_RS03640 (SPSF3K_00745) - 729939..730814 (+) 876 WP_004234721.1 DNA polymerase III subunit delta' -
  SPSF3K_RS03645 (SPSF3K_00746) yaaT 730811..731611 (+) 801 WP_003104246.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  SPSF3K_RS03650 (SPSF3K_00747) yabA 731655..731924 (+) 270 WP_045406722.1 DNA replication initiation control protein YabA -
  SPSF3K_RS03655 (SPSF3K_00748) rsmI 731928..732797 (+) 870 WP_003106249.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SPSF3K_RS03660 (SPSF3K_00749) - 732947..733342 (+) 396 WP_003104681.1 DUF5684 domain-containing protein -
  SPSF3K_RS03665 (SPSF3K_00750) - 733370..734002 (-) 633 WP_003106250.1 copper homeostasis protein CutC -
  SPSF3K_RS03670 (SPSF3K_00751) serC 734119..735210 (+) 1092 WP_003106251.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  SPSF3K_RS03675 (SPSF3K_00752) - 735233..735781 (+) 549 WP_004234714.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 266 a.a.        Molecular weight: 30177.09 Da        Isoelectric Point: 8.4486

>NTDB_id=218950 SPSF3K_RS03645 WP_003104246.1 730811..731611(+) (yaaT) [Streptococcus parauberis strain SPOF3K]
MTKVIGVKYGQANLAKFVKTDKEFPETSLLVIKDGKGSYLAKVSHKMREIADEKLPKDLPEIVREASEMDTKAHENNASY
AQSSRKLVKELIEANKLQMKIVDIIFPLERSFVLITFTAEDRVDFRQLLKDLATLFKTRIELRQINSREEAKIHGAIGPC
GRPLCCTSFLGEFPPVSIKMLKNQGLSLNSGKSQGYCGRLLCCLKYEDDFYKESKQKFPDYGTIVETKDGLGRVVSIDLF
KEILKIKLEENDTVVPYPLEEVKFGQ

Nucleotide


Download         Length: 801 bp        

>NTDB_id=218950 SPSF3K_RS03645 WP_003104246.1 730811..731611(+) (yaaT) [Streptococcus parauberis strain SPOF3K]
ATGACTAAGGTAATTGGTGTCAAGTACGGACAAGCAAACTTGGCGAAATTTGTAAAAACAGATAAAGAATTTCCGGAAAC
AAGTCTGCTTGTTATAAAAGATGGCAAAGGTAGTTATTTAGCTAAAGTTTCACATAAGATGAGAGAAATTGCTGACGAAA
AATTACCCAAAGATCTTCCAGAGATTGTTCGAGAAGCCTCTGAAATGGACACCAAAGCCCATGAAAACAATGCTAGTTAT
GCCCAATCTTCTCGAAAACTTGTTAAAGAGCTCATTGAAGCTAACAAGTTACAAATGAAGATTGTTGATATTATCTTTCC
TTTAGAAAGAAGTTTCGTTTTGATAACATTTACAGCTGAGGACCGTGTTGATTTCAGACAACTATTAAAGGACTTAGCTA
CGCTGTTCAAAACAAGAATTGAATTAAGACAAATTAATAGCCGAGAAGAAGCAAAAATCCATGGGGCAATTGGGCCTTGT
GGTCGTCCCTTATGCTGTACGAGCTTTTTAGGCGAGTTTCCCCCTGTTTCGATAAAAATGTTAAAAAATCAAGGATTATC
ATTAAATTCTGGCAAAAGTCAGGGTTATTGTGGACGTTTGCTGTGTTGTTTAAAATATGAAGACGATTTCTATAAAGAAA
GTAAGCAAAAATTTCCTGATTATGGCACAATTGTTGAAACAAAAGATGGTTTAGGACGAGTTGTCTCTATTGACCTCTTT
AAAGAAATTCTTAAAATTAAACTAGAAGAAAATGATACAGTTGTTCCTTACCCACTAGAGGAGGTAAAATTTGGTCAATA
A

Domains


Predicted by InterProScan.

(61-145)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

40.684

98.872

0.402


Multiple sequence alignment