Detailed information NTG0218905

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: B1761_RS01315
• Genome accession: NZ_CP019935
• Coordinates: 229046..229927 (-)
• Length: 293 a.a.
• NCBI ID: WP_014608376.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain APC151
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 224046..234927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B1761_RS01290 (B1761_01295)	vicR	224750..225457 (-)	708	WP_011681206.1	response regulator YycF	Regulator
B1761_RS01295 (B1761_01300)	-	225984..226751 (+)	768	WP_014608372.1	amino acid ABC transporter ATP-binding protein	-
B1761_RS01300 (B1761_01305)	-	226763..227596 (+)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
B1761_RS01305 (B1761_01310)	-	227614..228312 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
B1761_RS01310 (B1761_01315)	-	228324..228974 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
B1761_RS01315 (B1761_01320)	endA	229046..229927 (-)	882	WP_014608376.1	DNA/RNA non-specific endonuclease	Machinery gene
B1761_RS01320 (B1761_01325)	-	229989..230177 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
B1761_RS01325 (B1761_01330)	murA	230179..231450 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
B1761_RS01330 (B1761_01335)	-	231520..231756 (-)	237	WP_002946959.1	DUF1146 family protein	-
B1761_RS01335 (B1761_01340)	galE	231944..232957 (-)	1014	WP_014608379.1	UDP-glucose 4-epimerase GalE	-
B1761_RS01340	-	232972..233475 (-)	504	WP_224102963.1	DUF4832 domain-containing protein	-
B1761_RS01345	-	233465..233917 (-)	453	WP_011681214.1	hypothetical protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31774.44 Da
• Isoelectric Point: 10.0477

>NTDB_id=218905 B1761_RS01315 WP_014608376.1 229046..229927(-) (endA) [Streptococcus thermophilus strain APC151]
MAKRETSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=218905 B1761_RS01315 WP_014608376.1 229046..229927(-) (endA) [Streptococcus thermophilus strain APC151]
ATGGCAAAAAGAGAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594