Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   CXR04_RS16235 Genome accession   NZ_CP025407
Coordinates   3768651..3769775 (+) Length   374 a.a.
NCBI ID   WP_101423058.1    Uniprot ID   -
Organism   Streptomyces sp. CMB-StM0423     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3763651..3774775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXR04_RS16215 (CXR04_16215) - 3763778..3764377 (+) 600 WP_101423050.1 TetR/AcrR family transcriptional regulator -
  CXR04_RS16220 (CXR04_16220) - 3764409..3764912 (-) 504 WP_101423052.1 hypothetical protein -
  CXR04_RS16225 (CXR04_16225) ilvD 3765072..3766925 (-) 1854 WP_101423054.1 dihydroxy-acid dehydratase -
  CXR04_RS16230 (CXR04_16230) radA 3767086..3768540 (+) 1455 WP_101423056.1 DNA repair protein RadA Machinery gene
  CXR04_RS16235 (CXR04_16235) disA 3768651..3769775 (+) 1125 WP_101423058.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  CXR04_RS16240 (CXR04_16240) - 3769970..3770854 (-) 885 WP_101423060.1 hypothetical protein -
  CXR04_RS16245 (CXR04_16245) - 3770982..3771560 (+) 579 WP_101423062.1 phosphatase PAP2 family protein -
  CXR04_RS16250 (CXR04_16250) - 3771634..3773487 (+) 1854 WP_101423064.1 sigma-70 family RNA polymerase sigma factor -
  CXR04_RS16255 (CXR04_16255) - 3773691..3774509 (-) 819 WP_101426407.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40233.95 Da        Isoelectric Point: 5.2177

>NTDB_id=218761 CXR04_RS16235 WP_101423058.1 3768651..3769775(+) (disA) [Streptomyces sp. CMB-StM0423]
MAAGDRVGAPGRAGGSSGSDAAVRAALSAVAPGTGLRDGLERVLRGNTGGLIVLGTDKIIESICTGGFVLDVEFTATRLR
ELCKLDGAVVLDQDITRIERAGVQLLPDASIPTEETGTRHRTAQRVSIQSGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERQLVVRDYVPERTGRRPHTVERALTELDRLAHGELLELPIVARSLGYSGVPETLDAAVSPRGYRLLAKVPRIPSA
VIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=218761 CXR04_RS16235 WP_101423058.1 3768651..3769775(+) (disA) [Streptomyces sp. CMB-StM0423]
GTGGCAGCAGGCGACCGGGTGGGCGCCCCGGGCAGAGCCGGCGGCAGTTCCGGCTCCGATGCCGCGGTGAGGGCCGCGCT
GAGCGCGGTCGCGCCCGGCACGGGGCTGCGTGACGGCCTGGAGCGGGTCCTCCGCGGCAACACGGGCGGGCTCATCGTGC
TGGGCACGGACAAGATCATCGAGTCCATCTGCACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGCCGTGGTCCTCGACCAGGACATCACGCGGATCGAGCGCGCGGGCGTGCAGTTGCTGCC
CGACGCCTCGATCCCCACCGAGGAGACGGGCACCCGCCACCGCACCGCGCAGCGGGTGTCGATCCAGAGTGGCTTCCCCG
TCGTCTCCGTCAGCCAGTCGATGCGGCTCATCGCGCTGTACGTCGACGGCCAGCGGCGCGTGCTGGAGGACTCCGCCGCG
ATCCTCTCCCGGGCGAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCCGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTGCTGTCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAGCCGGAACGCCAGCTCGTCGTCAGGGACTACGTGCCGGAGCGCACCGGCCGCCGCCCGCACACCGTGGAGCG
CGCGCTCACCGAGCTGGACCGGCTCGCCCACGGCGAGCTGCTCGAACTGCCCATCGTGGCCCGCTCGCTGGGCTATTCCG
GGGTGCCCGAGACCCTGGACGCCGCGGTCTCGCCGCGGGGTTACCGGCTGCTGGCCAAGGTGCCGCGCATCCCCAGCGCC
GTCATCGACCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCCCGCTCGGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.115

93.048

0.42


Multiple sequence alignment