Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   B2G52_RS09660 Genome accession   NZ_CP019894
Coordinates   1788401..1788862 (+) Length   153 a.a.
NCBI ID   WP_003714507.1    Uniprot ID   A0AAU8VH58
Organism   Neisseria lactamica strain Y92-1009     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1783401..1793862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G52_RS09630 (B2G52_09630) - 1784112..1785326 (-) 1215 WP_003714495.1 pyridoxal phosphate-dependent aminotransferase -
  B2G52_RS09635 (B2G52_09635) - 1785415..1785624 (-) 210 WP_002223595.1 tautomerase family protein -
  B2G52_RS09640 (B2G52_09640) - 1785732..1785917 (+) 186 Protein_1782 DUF4198 domain-containing protein -
  B2G52_RS09645 (B2G52_09645) - 1785975..1787240 (-) 1266 WP_078835989.1 Glu/Leu/Phe/Val family dehydrogenase -
  B2G52_RS09655 (B2G52_09655) - 1787637..1788344 (+) 708 WP_003714505.1 phosphoglycolate phosphatase -
  B2G52_RS09660 (B2G52_09660) recX 1788401..1788862 (+) 462 WP_003714507.1 recombination regulator RecX Regulator
  B2G52_RS09665 (B2G52_09665) - 1788936..1789097 (+) 162 WP_003714510.1 hypothetical protein -
  B2G52_RS09670 (B2G52_09670) - 1789250..1789732 (+) 483 WP_003710586.1 acyl-CoA thioesterase -
  B2G52_RS09675 (B2G52_09675) - 1790131..1791171 (-) 1041 WP_003714512.1 peptidoglycan DD-metalloendopeptidase family protein -
  B2G52_RS09680 (B2G52_09680) surE 1791274..1792020 (-) 747 WP_003714514.1 5'/3'-nucleotidase SurE -
  B2G52_RS09685 (B2G52_09685) - 1792037..1793593 (-) 1557 WP_045750295.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17897.29 Da        Isoelectric Point: 9.8430

>NTDB_id=218747 B2G52_RS09660 WP_003714507.1 1788401..1788862(+) (recX) [Neisseria lactamica strain Y92-1009]
MKPQKSLRARAMDILSRQEVSRLGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAETYIRSKSRKHGLLRLKQALAQ
QGIDEETSYKLLPDRSSEKQTAMDVLRKKFKQPAADLKEKQKQARFLAYRGFDADTVQTALKRAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=218747 B2G52_RS09660 WP_003714507.1 1788401..1788862(+) (recX) [Neisseria lactamica strain Y92-1009]
ATGAAACCCCAAAAATCACTCCGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCCTCGGTCTGAAGCG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAACCTATATCCGCAGCAAAAGCCGCAAACACGGTTTATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAGACAAGCTACAAGCTGCTTCCGGACAGGTCGAGCGAAAAACAGACCGCCATGGACGTGTTGCG
TAAAAAATTCAAACAGCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGCTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACGCGCTTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

89.542

100

0.895

Multiple sequence alignment