Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   B2G52_RS04470 Genome accession   NZ_CP019894
Coordinates   795511..797553 (+) Length   680 a.a.
NCBI ID   WP_003712552.1    Uniprot ID   -
Organism   Neisseria lactamica strain Y92-1009     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 790511..802553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G52_RS04435 (B2G52_04435) - 790965..791339 (+) 375 WP_003712559.1 nuclear transport factor 2 family protein -
  B2G52_RS04440 (B2G52_04440) - 791379..791708 (+) 330 WP_003712558.1 MoaF-related domain-containing protein -
  B2G52_RS04445 (B2G52_04445) - 791754..792131 (+) 378 WP_003712557.1 hypothetical protein -
  B2G52_RS04450 (B2G52_04450) - 792176..792855 (-) 680 Protein_806 transposase -
  B2G52_RS04455 (B2G52_04455) rng 792997..794490 (-) 1494 WP_003712554.1 ribonuclease G -
  B2G52_RS04460 (B2G52_04460) grxC 794704..794961 (+) 258 WP_003712553.1 glutaredoxin 3 -
  B2G52_RS04465 (B2G52_04465) secB 794982..795425 (+) 444 WP_002214461.1 protein-export chaperone SecB -
  B2G52_RS04470 (B2G52_04470) recG 795511..797553 (+) 2043 WP_003712552.1 ATP-dependent DNA helicase RecG Machinery gene
  B2G52_RS11730 - 797631..798020 (-) 390 WP_155114563.1 hypothetical protein -
  B2G52_RS04480 (B2G52_04480) argC 798063..799106 (-) 1044 WP_003712551.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  B2G52_RS04485 (B2G52_04485) - 799180..799629 (-) 450 WP_003710179.1 DUF6636 domain-containing protein -
  B2G52_RS04490 (B2G52_04490) - 799634..800854 (-) 1221 WP_045750169.1 YihY family inner membrane protein -
  B2G52_RS04505 (B2G52_04505) queC 801371..802027 (+) 657 WP_003712548.1 7-cyano-7-deazaguanine synthase QueC -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74954.03 Da        Isoelectric Point: 8.3857

>NTDB_id=218726 B2G52_RS04470 WP_003712552.1 795511..797553(+) (recG) [Neisseria lactamica strain Y92-1009]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYAGHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGSA
AALRGNGVLTQALRRALPFALTDAQENVLAEVQTDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRLVNNVRRAEVEGFVLNTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=218726 B2G52_RS04470 WP_003712552.1 795511..797553(+) (recG) [Neisseria lactamica strain Y92-1009]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATCG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGGCTCCGGCAGCGTCCTTTTCCTGCGCTTCATCCACTTTTACGCCGGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGATGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTATGCCGTCTGAAGCTGCCGCACCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCGATGCGGCTGGCGCGGCAGAAGCGCATCGGCGGCTCGGCG
GCGGCATTGCGCGGCAATGGCGTATTGACCCAAGCCCTGCGCCGCGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
CGTGTTGGCGGAAGTTCAAACCGATATGGCGCAAACGCACCCGATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCAGGCGCACAGGTTGCCGTGATGGCCCCCACTGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGTATTGAGGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCTAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCCTGACCATCGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCACCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACAAACTGCCGCCCGGGCGCACCCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCAATACTTGCCGCAAAGGGCGGCAGGCGTATTGGGTTTGTCCGCTGATT
GAAGAAAGCGAAACCCTGCAATTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGAACTGAATGTCT
TAGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTGATTGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTGATTTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGTCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTAGAAGAA
GACCTGCACCTCTTGGAACAGGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGATGGCTTTCCGGCAGGGAAGGTTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

DEAD/DEAH box helicase (DEAD)

(283-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.5

100

0.975

Multiple sequence alignment