Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   CR921_RS05450 Genome accession   NZ_CP025399
Coordinates   1021470..1021952 (-) Length   160 a.a.
NCBI ID   WP_101415632.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain GABA     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1016470..1026952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR921_RS05430 pepT 1016951..1018174 (-) 1224 WP_046206468.1 peptidase T -
  CR921_RS05435 lepB 1018382..1018939 (-) 558 WP_011681191.1 signal peptidase I -
  CR921_RS05440 - 1019062..1020291 (-) 1230 WP_101415630.1 tetratricopeptide repeat protein -
  CR921_RS05445 - 1020281..1021459 (-) 1179 WP_101415631.1 AI-2E family transporter -
  CR921_RS05450 mutX 1021470..1021952 (-) 483 WP_101415632.1 NUDIX hydrolase Machinery gene
  CR921_RS05455 ftsX 1022108..1023037 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  CR921_RS05460 ftsE 1023030..1023722 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  CR921_RS05470 queG 1024961..1026079 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18923.35 Da        Isoelectric Point: 4.6450

>NTDB_id=218477 CR921_RS05450 WP_101415632.1 1021470..1021952(-) (mutX) [Streptococcus thermophilus strain GABA]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKEMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDRNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=218477 CR921_RS05450 WP_101415632.1 1021470..1021952(-) (mutX) [Streptococcus thermophilus strain GABA]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAGGAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACTTATGTCTTTAAGGTGACTGATTTTGAAGGGAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATCGTAACCAAAACTTGATAGATAAAACTGTAACATTCTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706