Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CR921_RS02550 Genome accession   NZ_CP025399
Coordinates   468703..469509 (+) Length   268 a.a.
NCBI ID   WP_101415551.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain GABA     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 463703..474509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR921_RS02530 tuf 464752..465948 (+) 1197 WP_002949971.1 elongation factor Tu -
  CR921_RS02535 tpiA 466197..466955 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  CR921_RS02540 tmk 467193..467822 (+) 630 WP_014608059.1 dTMP kinase -
  CR921_RS02545 - 467831..468706 (+) 876 WP_014727360.1 DNA polymerase III subunit delta' -
  CR921_RS02550 yaaT 468703..469509 (+) 807 WP_101415551.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  CR921_RS02555 yabA 469496..469816 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  CR921_RS02560 rsmI 469819..470685 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CR921_RS02565 - 470822..472057 (+) 1236 WP_011680839.1 ammonium transporter -
  CR921_RS02570 - 472068..472409 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  CR921_RS02575 - 472507..473163 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  CR921_RS02580 - 473186..474007 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  CR921_RS09930 - 474026..474496 (-) 471 Protein_448 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29857.30 Da        Isoelectric Point: 4.6494

>NTDB_id=218461 CR921_RS02550 WP_101415551.1 468703..469509(+) (yaaT) [Streptococcus thermophilus strain GABA]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMRVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=218461 CR921_RS02550 WP_101415551.1 468703..469509(+) (yaaT) [Streptococcus thermophilus strain GABA]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCCGTGGATTTGAATAGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGAGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTATC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414