Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   B1780_RS05195 Genome accession   NZ_CP019838
Coordinates   1028756..1029724 (+) Length   322 a.a.
NCBI ID   WP_002882700.1    Uniprot ID   A0A690GGM2
Organism   Campylobacter jejuni subsp. jejuni strain ATCC 33560     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1023756..1034724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1780_RS05170 (B1780_05230) cdsA 1024665..1025390 (-) 726 WP_002882703.1 phosphatidate cytidylyltransferase -
  B1780_RS05175 (B1780_05235) - 1025399..1025737 (-) 339 WP_002852397.1 hypothetical protein -
  B1780_RS05180 (B1780_05240) - 1025739..1027046 (-) 1308 WP_002882702.1 NFACT RNA binding domain-containing protein -
  B1780_RS05185 (B1780_05245) mobA 1027109..1027684 (+) 576 WP_002853737.1 molybdenum cofactor guanylyltransferase -
  B1780_RS05190 (B1780_05250) pldA 1027681..1028670 (+) 990 WP_002882701.1 phospholipase A -
  B1780_RS05195 (B1780_05255) ceuB 1028756..1029724 (+) 969 WP_002882700.1 ABC transporter permease Machinery gene
  B1780_RS05200 (B1780_05260) ceuC 1029717..1030655 (+) 939 WP_002882699.1 iron chelate uptake ABC transporter family permease subunit -
  B1780_RS05205 (B1780_05265) ceuD 1030652..1031407 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  B1780_RS05210 (B1780_05270) ceuB 1031420..1032412 (+) 993 WP_002882697.1 enterochelin ABC transporter substrate-binding protein CeuB -
  B1780_RS05220 (B1780_05280) - 1032638..1033192 (-) 555 WP_002882696.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35441.35 Da        Isoelectric Point: 9.6678

>NTDB_id=218449 B1780_RS05195 WP_002882700.1 1028756..1029724(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain ATCC 33560]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=218449 B1780_RS05195 WP_002882700.1 1028756..1029724(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain ATCC 33560]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTACTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A690GGM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment