Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | B1780_RS03845 | Genome accession | NZ_CP019838 |
| Coordinates | 754704..755006 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni subsp. jejuni strain ATCC 33560 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 749704..760006
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1780_RS03820 (B1780_03865) | rpsR | 750066..750326 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| B1780_RS03825 (B1780_03870) | lon | 750387..752762 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| B1780_RS03830 (B1780_03875) | bamD | 752779..753426 (-) | 648 | WP_002882608.1 | outer membrane protein assembly factor BamD | - |
| B1780_RS03835 (B1780_03880) | fliW | 753587..753976 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| B1780_RS03840 (B1780_03885) | proC | 753976..754707 (+) | 732 | WP_002882606.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| B1780_RS03845 (B1780_03890) | ctsT | 754704..755006 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| B1780_RS03850 (B1780_03895) | - | 755003..755665 (+) | 663 | WP_002882605.1 | hypothetical protein | - |
| B1780_RS03855 (B1780_03900) | - | 755662..756114 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| B1780_RS03860 (B1780_03905) | hemD | 756111..756740 (-) | 630 | WP_002882604.1 | uroporphyrinogen-III synthase | - |
| B1780_RS03865 (B1780_03910) | thiE | 756718..757350 (-) | 633 | WP_002882603.1 | thiamine phosphate synthase | - |
| B1780_RS03870 (B1780_03915) | thiD | 757340..758152 (-) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| B1780_RS03875 (B1780_03920) | - | 758149..758835 (-) | 687 | WP_002882601.1 | endonuclease III domain-containing protein | - |
| B1780_RS03880 (B1780_03925) | - | 758832..759593 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=218442 B1780_RS03845 WP_002855822.1 754704..755006(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain ATCC 33560]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=218442 B1780_RS03845 WP_002855822.1 754704..755006(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain ATCC 33560]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |