Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SAO46_RS09815 Genome accession   NZ_CP025395
Coordinates   1944184..1945002 (-) Length   272 a.a.
NCBI ID   WP_001124431.1    Uniprot ID   -
Organism   Staphylococcus aureus O46     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1939184..1950002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAO46_RS09790 (SAO46_01789) - 1940277..1941254 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  SAO46_RS09800 (SAO46_01790) - 1941515..1942351 (-) 837 WP_000886457.1 membrane protein -
  SAO46_RS09805 (SAO46_01791) - 1942360..1943877 (-) 1518 WP_000535832.1 ABC transporter ATP-binding protein -
  SAO46_RS09810 (SAO46_01792) - 1943892..1944206 (-) 315 WP_000435806.1 YfhH family protein -
  SAO46_RS09815 (SAO46_01793) recX 1944184..1945002 (-) 819 WP_001124431.1 recombination regulator RecX Regulator
  SAO46_RS09820 (SAO46_01794) sgtB 1945263..1946072 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  SAO46_RS09825 - 1946330..1947847 (+) 1518 WP_078071271.1 IS3-like element ISSau2 family transposase -
  SAO46_RS09830 (SAO46_01797) - 1948016..1948531 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  SAO46_RS09835 (SAO46_01798) - 1948661..1948822 (-) 162 WP_001005407.1 SE1561 family protein -
  SAO46_RS09840 - 1949149..1949250 (+) 102 WP_101305152.1 hypothetical protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32258.11 Da        Isoelectric Point: 6.3167

>NTDB_id=218414 SAO46_RS09815 WP_001124431.1 1944184..1945002(-) (recX) [Staphylococcus aureus O46]
MPKITKIEVQKKNKERFNLFLDQQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=218414 SAO46_RS09815 WP_001124431.1 1944184..1945002(-) (recX) [Staphylococcus aureus O46]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACCAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993