Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   XPE_RS19085 Genome accession   NZ_CP019725
Coordinates   4269434..4269835 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas perforans 91-118     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4264434..4274835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XPE_RS22220 (XPE_19010) - 4266337..4266723 (-) 387 WP_033478942.1 hypothetical protein -
  XPE_RS19070 (XPE_19015) - 4266751..4267032 (+) 282 Protein_3582 ADP-ribosylglycohydrolase family protein -
  XPE_RS19075 (XPE_19020) - 4267375..4268250 (-) 876 WP_008575185.1 energy transducer TonB -
  XPE_RS19080 (XPE_19025) gshB 4268247..4269197 (-) 951 WP_008575184.1 glutathione synthase -
  XPE_RS19085 (XPE_19030) pilG 4269434..4269835 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  XPE_RS19090 (XPE_19035) - 4269853..4270215 (+) 363 WP_005913708.1 response regulator -
  XPE_RS19095 (XPE_19040) - 4270215..4270745 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  XPE_RS19100 (XPE_19045) - 4270785..4272821 (+) 2037 WP_008575181.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=218108 XPE_RS19085 WP_005913706.1 4269434..4269835(+) (pilG) [Xanthomonas perforans 91-118]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=218108 XPE_RS19085 WP_005913706.1 4269434..4269835(+) (pilG) [Xanthomonas perforans 91-118]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment