Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   CXG95_RS20335 Genome accession   NZ_CP025226
Coordinates   3895028..3895876 (+) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis strain PB3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3890028..3900876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXG95_RS20310 (CXG95_20305) rsmG 3890940..3891659 (+) 720 WP_003178044.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  CXG95_RS20315 (CXG95_20310) noc 3891757..3892608 (+) 852 WP_003178042.1 nucleoid occlusion protein -
  CXG95_RS20320 (CXG95_20315) - 3892664..3893521 (+) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  CXG95_RS20325 (CXG95_20320) - 3893588..3894031 (+) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  CXG95_RS20330 (CXG95_20325) soj 3894274..3895035 (+) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  CXG95_RS20335 (CXG95_20330) spo0J 3895028..3895876 (+) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  CXG95_RS20340 (CXG95_20335) yyaC 3895913..3896530 (-) 618 WP_003178032.1 spore protease YyaC -
  CXG95_RS20345 (CXG95_20340) - 3896834..3897847 (+) 1014 WP_003178030.1 hypothetical protein -
  CXG95_RS20350 (CXG95_20345) - 3897935..3898141 (+) 207 WP_011201785.1 DUF951 domain-containing protein -
  CXG95_RS20360 (CXG95_20355) ychF 3898320..3899420 (+) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  CXG95_RS20365 (CXG95_20360) rpsF 3899534..3899821 (+) 288 WP_003178026.1 30S ribosomal protein S6 -
  CXG95_RS20370 (CXG95_20365) ssbA 3899868..3900380 (+) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  CXG95_RS20375 (CXG95_20370) rpsR 3900432..3900671 (+) 240 WP_003178022.1 30S ribosomal protein S18 -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=217763 CXG95_RS20335 WP_003178034.1 3895028..3895876(+) (spo0J) [Bacillus licheniformis strain PB3]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=217763 CXG95_RS20335 WP_003178034.1 3895028..3895876(+) (spo0J) [Bacillus licheniformis strain PB3]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401


Multiple sequence alignment