Detailed information NTG0217738

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CXG95_RS14805
• Genome accession: NZ_CP025226
• Coordinates: 2811744..2812862 (-)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain PB3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2806744..2817862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXG95_RS14780 (CXG95_14785)	-	2807453..2808679 (-)	1227	WP_009328954.1	DNA repair exonuclease	-
CXG95_RS14785 (CXG95_14790)	-	2808799..2810067 (-)	1269	WP_003180232.1	ABC transporter permease	-
CXG95_RS14790 (CXG95_14795)	-	2810060..2810956 (-)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
CXG95_RS14795 (CXG95_14800)	-	2811074..2811259 (+)	186	WP_003180228.1	YhzD family protein	-
CXG95_RS14800 (CXG95_14805)	-	2811334..2811612 (-)	279	WP_003180226.1	hypothetical protein	-
CXG95_RS21885	-	2811617..2811754 (-)	138	WP_016886158.1	hypothetical protein	-
CXG95_RS14805 (CXG95_14810)	rapC	2811744..2812862 (-)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
CXG95_RS14810 (CXG95_14815)	-	2812989..2813765 (-)	777	WP_011197707.1	enoyl-CoA hydratase	-
CXG95_RS14815 (CXG95_14820)	-	2813966..2814295 (+)	330	WP_016886161.1	hypothetical protein	-
CXG95_RS14820 (CXG95_14825)	-	2814360..2814857 (+)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
CXG95_RS14825 (CXG95_14830)	-	2814864..2816075 (+)	1212	WP_003180218.1	cation:proton antiporter	-
CXG95_RS14830 (CXG95_14835)	-	2816157..2817662 (-)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=217738 CXG95_RS14805 WP_009328956.1 2811744..2812862(-) (rapC) [Bacillus licheniformis strain PB3]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=217738 CXG95_RS14805 WP_009328956.1 2811744..2812862(-) (rapC) [Bacillus licheniformis strain PB3]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374