Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   CXG95_RS13845 Genome accession   NZ_CP025226
Coordinates   2617428..2618576 (-) Length   382 a.a.
NCBI ID   WP_009328825.1    Uniprot ID   Q65LB1
Organism   Bacillus licheniformis strain PB3     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2612428..2623576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXG95_RS13825 (CXG95_13835) - 2612518..2613171 (+) 654 WP_009328821.1 lytic transglycosylase domain-containing protein -
  CXG95_RS13830 (CXG95_13840) - 2613453..2613851 (+) 399 WP_003180652.1 thiol management oxidoreductase -
  CXG95_RS13835 (CXG95_13845) spxH 2613848..2614750 (+) 903 WP_009328822.1 protease adaptor protein SpxH -
  CXG95_RS22115 - 2615162..2615329 (+) 168 WP_009328823.1 hypothetical protein -
  CXG95_RS13840 (CXG95_13850) pepF 2615386..2617215 (-) 1830 WP_282334326.1 oligoendopeptidase F Regulator
  CXG95_RS13845 (CXG95_13855) coiA 2617428..2618576 (-) 1149 WP_009328825.1 competence protein CoiA family protein Machinery gene
  CXG95_RS13850 (CXG95_13860) - 2618694..2620289 (+) 1596 WP_009328826.1 sensor histidine kinase -
  CXG95_RS13855 (CXG95_13865) - 2620312..2621028 (+) 717 WP_009328827.1 response regulator -
  CXG95_RS13860 (CXG95_13870) - 2621048..2622553 (-) 1506 WP_021837281.1 tripartite tricarboxylate transporter permease -
  CXG95_RS13865 (CXG95_13875) - 2622576..2623031 (-) 456 WP_009328829.1 tripartite tricarboxylate transporter TctB family protein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 44647.01 Da        Isoelectric Point: 9.9815

>NTDB_id=217720 CXG95_RS13845 WP_009328825.1 2617428..2618576(-) (coiA) [Bacillus licheniformis strain PB3]
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=217720 CXG95_RS13845 WP_009328825.1 2617428..2618576(-) (coiA) [Bacillus licheniformis strain PB3]
ATGTTCAGTGCAATGATCGATCAAGGCGGGACCATCTGCCTTGCCGACGGATACAAAGCCGAAGATCTCAAGCGATTGAG
AAAAAGACATGCATTTTACTGCCCGGTGTGCCGGTGTGAACTCGACCTGAAAATCGGTTCCGTCAAGCTTCCGCATTTCG
CTCATAAGCCGGATGCAGCATGTCCGGTGCCCCATGAACCGGAGAGCCCCTATCACCTGAAAGGAAAGCGGCTGTTGTAC
GAATGGCTTGGCAGACAAGGACTCCGCCCGGTGCTTGAACCGTATTTGCAAGAGATCAGACAAAGGCCCGATTTGCTGCT
GGAACACGGAACCCGCCAGGTTGCGGTTGAATTTCAATGTGCGAATCTCAATGCCGCAGCGTATCGCAAAAGGACCGAAG
GCTTTCTCAGACTGGGAATCGAGCCCGTATGGATTCTCGGCGGAAACCGGATAAAACGCTTGACGGGGGATTTATTTCAG
CTTTCGCGGTTTCACTGGCAGTTCATTCAGAAAAGCGACAAGCCCCCAAAGCTCCTGTTTTTTTGCCCCGAACAAAAGGC
TTTCATCATCCTCGAACACCTCATTCCCTTTCAAACAAACAAAACATCCGCATCCTTGCGCTTTCTTCCTCTTGCTGAAG
CAAGCTGGCGTAATGTAACAGAACGAGAAAGCCGTTCGCCTCTCCAGCTCAAAGGCTGGAAAAAGAACATCCTCAGCTTT
CGGATGTCGGCCGTGCGTTTTTTATCAAAAGAAACGAAGCAGATTGCCGCCCTCTTTTATGAAAATCATCAGCTTCCGCT
CCCGTTTTTTCCCTCAGAAGCCTTTCTCCCGGTGCCGTCAGGCTATATTTTTGCCCACCCGGTTTATGTATGGCAAGGGT
ACCTTTTTTTATTTATAACGAAGCATGATACATTTCGCCTGCAGTCTGCGCTTCACTATATGGACTGGCTCATCAAGGGC
AAAAGGCTGAAGCTGAGATGGAGCGGGCGGCAAACGGCTGCGGATGCCGTCGGTGAATACATTTGTTTTTTGCATAAAAA
AGGATTTTTGGTGAGGAAAGAGGAATTTTATTATTCCGCGGGTTCTTTTGTTCCGGAGCCGCGGTTAGAGGCGCTGTTAA
AAAGGGATGAACATTATTTTTCCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65LB1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

42.308

95.288

0.403