Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CXG95_RS09995 | Genome accession | NZ_CP025226 |
| Coordinates | 1905773..1906144 (-) | Length | 123 a.a. |
| NCBI ID | WP_017474791.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain PB3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1900773..1911144
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXG95_RS09970 (CXG95_09980) | sspO | 1903659..1903805 (+) | 147 | WP_003182252.1 | small acid-soluble spore protein O | - |
| CXG95_RS09975 (CXG95_09985) | - | 1903847..1903993 (+) | 147 | WP_003182250.1 | small acid-soluble spore protein P | - |
| CXG95_RS09980 (CXG95_09990) | - | 1904129..1904536 (+) | 408 | WP_017474790.1 | Hsp20/alpha crystallin family protein | - |
| CXG95_RS09985 (CXG95_09995) | - | 1904741..1905169 (+) | 429 | WP_003182245.1 | DUF2621 domain-containing protein | - |
| CXG95_RS09990 (CXG95_10000) | - | 1905205..1905699 (-) | 495 | WP_085959522.1 | cytochrome c biogenesis protein CcdC | - |
| CXG95_RS09995 (CXG95_10005) | pilH | 1905773..1906144 (-) | 372 | WP_017474791.1 | response regulator | Machinery gene |
| CXG95_RS10000 (CXG95_10010) | - | 1906226..1906933 (-) | 708 | WP_003182240.1 | cytochrome c biogenesis protein CcdA | - |
| CXG95_RS10005 (CXG95_10015) | - | 1907176..1907337 (+) | 162 | WP_229107189.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| CXG95_RS10010 (CXG95_10020) | - | 1907418..1907636 (-) | 219 | WP_003182236.1 | YneF family protein | - |
| CXG95_RS10015 (CXG95_10025) | sirA | 1907721..1908158 (-) | 438 | WP_003182234.1 | sporulation inhibitor of replication protein SirA | - |
| CXG95_RS10020 (CXG95_10030) | recP/tkt | 1908313..1910316 (-) | 2004 | WP_009328229.1 | transketolase | Machinery gene |
| CXG95_RS10025 (CXG95_10035) | - | 1910483..1910716 (-) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13981.50 Da Isoelectric Point: 4.5739
>NTDB_id=217690 CXG95_RS09995 WP_017474791.1 1905773..1906144(-) (pilH) [Bacillus licheniformis strain PB3]
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKWIVVEVIEAGAKDFIVKPFEETKVVEAIRHVLGNACR
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKWIVVEVIEAGAKDFIVKPFEETKVVEAIRHVLGNACR
Nucleotide
Download Length: 372 bp
>NTDB_id=217690 CXG95_RS09995 WP_017474791.1 1905773..1906144(-) (pilH) [Bacillus licheniformis strain PB3]
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGTGGATCGTCGTTGAGGTGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGATGA
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGTGGATCGTCGTTGAGGTGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.585 |
100 |
0.366 |