Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   CXG95_RS03435 Genome accession   NZ_CP025226
Coordinates   669134..670003 (+) Length   289 a.a.
NCBI ID   WP_011198252.1    Uniprot ID   Q8VQ63
Organism   Bacillus licheniformis strain PB3     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 664134..675003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXG95_RS03405 (CXG95_03405) - 664492..665043 (+) 552 WP_003184868.1 isochorismatase family cysteine hydrolase -
  CXG95_RS03410 (CXG95_03410) - 665121..666530 (+) 1410 WP_228767691.1 nicotinate phosphoribosyltransferase -
  CXG95_RS03415 (CXG95_03415) - 666709..667929 (+) 1221 WP_003184864.1 HDOD domain-containing protein -
  CXG95_RS03420 (CXG95_03420) - 667972..668310 (-) 339 WP_003184862.1 hypothetical protein -
  CXG95_RS03430 (CXG95_03430) degQ 668805..668945 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CXG95_RS03435 (CXG95_03435) comQ 669134..670003 (+) 870 WP_011198252.1 polyprenyl synthetase family protein Regulator
  CXG95_RS03440 (CXG95_03440) comX 670018..670182 (+) 165 WP_011198251.1 competence pheromone ComX -
  CXG95_RS03445 (CXG95_03445) - 670222..671421 (+) 1200 WP_227601289.1 PDZ domain-containing protein -
  CXG95_RS03450 (CXG95_03450) - 671443..672605 (+) 1163 WP_085959889.1 IS3 family transposase -
  CXG95_RS03455 (CXG95_03455) - 672648..673832 (+) 1185 Protein_682 sensor histidine kinase -
  CXG95_RS03460 (CXG95_03460) comA 673919..674557 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  CXG95_RS03465 (CXG95_03465) - 674574..674963 (+) 390 WP_003184847.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 32743.41 Da        Isoelectric Point: 4.6799

>NTDB_id=217647 CXG95_RS03435 WP_011198252.1 669134..670003(+) (comQ) [Bacillus licheniformis strain PB3]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=217647 CXG95_RS03435 WP_011198252.1 669134..670003(+) (comQ) [Bacillus licheniformis strain PB3]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.361

100

0.457