Detailed information NTG0217576

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Mag101_RS17095
• Genome accession: NZ_CP019650
• Coordinates: 4116385..4117374 (-)
• Length: 329 a.a.
• NCBI ID: WP_335645078.1
• Uniprot ID: -
• Organism: Microbulbifer agarilyticus strain GP101
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4111385..4122374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Mag101_RS17070 (Mag101_17140)	trmB	4111705..4112442 (-)	738	WP_077407716.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
Mag101_RS17075 (Mag101_17145)	-	4112626..4113003 (-)	378	WP_077407718.1	DUF423 domain-containing protein	-
Mag101_RS17080 (Mag101_17150)	rpoH	4113268..4114122 (-)	855	WP_010132063.1	RNA polymerase sigma factor RpoH	-
Mag101_RS17085 (Mag101_17155)	ftsX	4114474..4115472 (-)	999	WP_077407720.1	permease-like cell division protein FtsX	-
Mag101_RS17090 (Mag101_17160)	ftsE	4115456..4116139 (-)	684	WP_077407722.1	cell division ATP-binding protein FtsE	-
Mag101_RS17095 (Mag101_17165)	pilA	4116385..4117374 (-)	990	WP_335645078.1	signal recognition particle-docking protein FtsY	Machinery gene
Mag101_RS17100 (Mag101_17170)	rsmD	4117865..4118461 (+)	597	WP_077407726.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
Mag101_RS17105 (Mag101_17175)	coaD	4118596..4119075 (+)	480	WP_077407728.1	pantetheine-phosphate adenylyltransferase	-
Mag101_RS17110 (Mag101_17180)	ggt	4119149..4120945 (+)	1797	WP_077407730.1	gamma-glutamyltransferase	-
Mag101_RS17115 (Mag101_17185)	sugE	4121006..4121332 (+)	327	WP_077407731.1	quaternary ammonium compound efflux SMR transporter SugE	-
Mag101_RS17120 (Mag101_17190)	-	4121334..4121906 (-)	573	WP_232325072.1	disulfide bond formation protein B	-
Mag101_RS18045	-	4121986..4122144 (-)	159	WP_198040028.1	DUF5993 family protein	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 35281.23 Da
• Isoelectric Point: 5.0082

>NTDB_id=217576 Mag101_RS17095 WP_335645078.1 4116385..4117374(-) (pilA) [Microbulbifer agarilyticus strain GP101]
MEVAQDEPAPVQEPVQEKPKKEGFFARIRRGLSRTSSQFAEGMGNLFLGAKEIDEDLMEELETQLLMADVGVDATTEIID
RLTERVSRRELSNGEALYKALQEELAGLLDKVEAPLVIDQSKKPFVILVVGVNGVGKTTTIGKLAHRYLNEGQSVMLAAG
DTFRAAAVEQLQVWGQRHNVPVVAQHTGADSASVIFDAIQSAQSRNVDVVIADTAGRLHNKSNLMEELSKVRRVMGKLDG
AAPHEVLLVLDAGTGQNALSQAGTFKDSAGVSGLVLTKLDGTAKGGVIFALAQKLGIPVRFIGVGEQAEDLQPFVAKDFV
AALFNRAQG

Nucleotide

• Length: 990 bp

>NTDB_id=217576 Mag101_RS17095 WP_335645078.1 4116385..4117374(-) (pilA) [Microbulbifer agarilyticus strain GP101]
ATGGAAGTGGCGCAGGACGAGCCAGCGCCGGTACAGGAGCCGGTGCAGGAAAAGCCCAAGAAAGAGGGTTTCTTTGCCCG
TATTCGCCGCGGCCTGTCGCGCACCAGCAGCCAGTTTGCCGAAGGGATGGGCAACCTGTTCCTGGGCGCCAAGGAAATCG
ACGAAGACCTGATGGAGGAGCTGGAAACCCAGCTTCTCATGGCAGATGTGGGTGTAGATGCCACCACCGAGATTATCGAC
CGCCTCACCGAGCGGGTTTCCCGACGCGAACTGTCTAATGGCGAGGCGTTGTACAAAGCGCTGCAGGAAGAGCTGGCCGG
CTTGCTGGACAAGGTCGAAGCGCCGCTGGTGATCGACCAGAGTAAAAAGCCGTTTGTGATTCTGGTGGTTGGCGTGAATG
GCGTCGGCAAGACCACCACCATCGGCAAGTTGGCCCACCGCTACCTGAACGAAGGCCAGTCGGTGATGCTCGCCGCCGGT
GATACCTTCCGGGCCGCCGCTGTGGAACAGCTGCAAGTTTGGGGACAGCGTCACAATGTGCCGGTTGTGGCCCAGCATAC
TGGCGCGGATAGTGCCTCTGTGATCTTTGATGCGATACAGTCTGCCCAATCCCGCAATGTGGATGTGGTAATTGCGGATA
CCGCCGGGCGCCTGCACAACAAGTCGAATCTGATGGAAGAGCTTTCCAAGGTGCGCCGTGTCATGGGCAAACTCGACGGC
GCCGCACCGCACGAGGTGCTGCTGGTACTGGATGCGGGCACCGGCCAGAACGCGCTGTCGCAGGCGGGGACCTTCAAGGA
TTCCGCGGGGGTCAGCGGCCTGGTACTCACCAAGCTCGATGGCACCGCCAAGGGCGGGGTGATTTTCGCGCTGGCACAGA
AGCTGGGGATTCCGGTACGCTTTATCGGCGTGGGGGAGCAGGCAGAAGACCTGCAGCCATTTGTGGCAAAAGACTTTGTG
GCGGCGCTGTTTAATCGCGCCCAGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (124-324)

• SRP54-type protein, helical bundle domain (SRP54_N) (41-105)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.266	96.049	0.492