Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | Mag101_RS01075 | Genome accession | NZ_CP019650 |
| Coordinates | 259218..260366 (-) | Length | 382 a.a. |
| NCBI ID | WP_077399580.1 | Uniprot ID | A0A1Q2M1J4 |
| Organism | Microbulbifer agarilyticus strain GP101 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 254218..265366
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Mag101_RS01055 (Mag101_01085) | - | 255226..255984 (+) | 759 | WP_157520080.1 | LytR/AlgR family response regulator transcription factor | - |
| Mag101_RS01060 (Mag101_01090) | - | 256022..257710 (-) | 1689 | WP_077399574.1 | amidohydrolase | - |
| Mag101_RS01065 (Mag101_01095) | - | 257743..258360 (-) | 618 | WP_077399577.1 | LysE family translocator | - |
| Mag101_RS01070 (Mag101_01100) | - | 258376..259122 (-) | 747 | WP_077407963.1 | SDR family oxidoreductase | - |
| Mag101_RS01075 (Mag101_01105) | pilU | 259218..260366 (-) | 1149 | WP_077399580.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| Mag101_RS01080 (Mag101_01110) | pilT | 260582..261616 (-) | 1035 | WP_077399583.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| Mag101_RS01085 (Mag101_01115) | - | 261715..262410 (+) | 696 | WP_077399586.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| Mag101_RS01090 (Mag101_01120) | - | 262496..264532 (-) | 2037 | WP_077399589.1 | alpha/beta hydrolase family protein | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 42686.97 Da Isoelectric Point: 5.9424
>NTDB_id=217557 Mag101_RS01075 WP_077399580.1 259218..260366(-) (pilU) [Microbulbifer agarilyticus strain GP101]
MEIERLLQLVSEKGASDLFITAGVPASIKLHGKIVPVTTSPLSPEKAREMVIGIMNDRQKKEFIENKELNFAISLRNVGR
FRVSAFFQRNLVGMVLRRIETKIPTIDGLGLPEQLKELAMTKRGLIIFVGATGTGKSTSLASMIGHRNENSKGHIISIED
PIEFIHQHRGCIVTQREVGLDTESFETALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPADRHEQLWMDLSLNLQAMVAQQLVPTPDGDGRRACLEIMINTPLMSDLIRKGEVHKMKELMKRSIEQGMQTFDQA
LYELYDRGEITYEDALAHADSANDLRLMIKLKSESDAEYLNSAADELSLAGDNDNNSGPQLY
MEIERLLQLVSEKGASDLFITAGVPASIKLHGKIVPVTTSPLSPEKAREMVIGIMNDRQKKEFIENKELNFAISLRNVGR
FRVSAFFQRNLVGMVLRRIETKIPTIDGLGLPEQLKELAMTKRGLIIFVGATGTGKSTSLASMIGHRNENSKGHIISIED
PIEFIHQHRGCIVTQREVGLDTESFETALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPADRHEQLWMDLSLNLQAMVAQQLVPTPDGDGRRACLEIMINTPLMSDLIRKGEVHKMKELMKRSIEQGMQTFDQA
LYELYDRGEITYEDALAHADSANDLRLMIKLKSESDAEYLNSAADELSLAGDNDNNSGPQLY
Nucleotide
Download Length: 1149 bp
>NTDB_id=217557 Mag101_RS01075 WP_077399580.1 259218..260366(-) (pilU) [Microbulbifer agarilyticus strain GP101]
ATGGAAATCGAACGACTCCTACAACTGGTGAGCGAAAAAGGCGCATCCGACCTGTTCATCACCGCCGGCGTACCCGCCTC
CATCAAACTGCACGGCAAAATCGTTCCCGTCACCACCTCACCGCTGTCTCCGGAAAAAGCCCGGGAAATGGTTATCGGCA
TCATGAACGACCGGCAGAAAAAAGAGTTCATCGAAAACAAAGAACTCAACTTCGCCATCTCCCTGCGCAACGTCGGCCGC
TTCCGGGTATCCGCCTTCTTCCAGCGCAACCTCGTCGGCATGGTACTGCGTCGAATCGAAACCAAGATTCCCACCATCGA
CGGACTCGGCCTGCCCGAGCAGCTCAAAGAGCTCGCCATGACCAAGCGCGGCCTGATTATCTTTGTGGGCGCAACCGGTA
CCGGTAAATCCACCTCACTGGCCTCCATGATCGGCCACCGTAACGAGAACTCGAAGGGTCACATCATCTCCATCGAAGAC
CCCATCGAATTTATCCACCAGCACCGTGGCTGTATCGTTACCCAGCGCGAAGTGGGCCTCGACACCGAATCCTTCGAGAC
CGCCCTGAAGAACACCCTGCGTCAGGCCCCCGACGTCATCCTCATTGGTGAGGTGCGTTCGCGGGAAACCATGGACCACG
CCATCGCCTTCGCCGAAACCGGCCACCTGTGTCTGTGTACCCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATTCACTTCTTCCCGGCGGACCGCCACGAACAGCTGTGGATGGACCTGTCGCTCAACCTGCAGGCCATGGTCGCGCAGCA
GCTGGTACCGACGCCGGACGGCGACGGTCGTCGCGCCTGTCTCGAAATCATGATCAACACCCCGCTGATGTCGGACCTGA
TCCGCAAAGGCGAAGTACACAAAATGAAAGAGCTGATGAAACGCTCCATCGAACAGGGTATGCAGACTTTCGACCAGGCC
CTGTACGAACTGTATGACCGCGGCGAAATCACCTACGAAGACGCCCTCGCTCACGCCGACTCCGCGAACGACCTGCGCCT
GATGATCAAGCTCAAGTCGGAGTCCGACGCCGAGTACCTCAACAGCGCCGCCGACGAACTGAGCCTGGCCGGCGACAACG
ACAACAACAGCGGCCCGCAGCTGTATTGA
ATGGAAATCGAACGACTCCTACAACTGGTGAGCGAAAAAGGCGCATCCGACCTGTTCATCACCGCCGGCGTACCCGCCTC
CATCAAACTGCACGGCAAAATCGTTCCCGTCACCACCTCACCGCTGTCTCCGGAAAAAGCCCGGGAAATGGTTATCGGCA
TCATGAACGACCGGCAGAAAAAAGAGTTCATCGAAAACAAAGAACTCAACTTCGCCATCTCCCTGCGCAACGTCGGCCGC
TTCCGGGTATCCGCCTTCTTCCAGCGCAACCTCGTCGGCATGGTACTGCGTCGAATCGAAACCAAGATTCCCACCATCGA
CGGACTCGGCCTGCCCGAGCAGCTCAAAGAGCTCGCCATGACCAAGCGCGGCCTGATTATCTTTGTGGGCGCAACCGGTA
CCGGTAAATCCACCTCACTGGCCTCCATGATCGGCCACCGTAACGAGAACTCGAAGGGTCACATCATCTCCATCGAAGAC
CCCATCGAATTTATCCACCAGCACCGTGGCTGTATCGTTACCCAGCGCGAAGTGGGCCTCGACACCGAATCCTTCGAGAC
CGCCCTGAAGAACACCCTGCGTCAGGCCCCCGACGTCATCCTCATTGGTGAGGTGCGTTCGCGGGAAACCATGGACCACG
CCATCGCCTTCGCCGAAACCGGCCACCTGTGTCTGTGTACCCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATTCACTTCTTCCCGGCGGACCGCCACGAACAGCTGTGGATGGACCTGTCGCTCAACCTGCAGGCCATGGTCGCGCAGCA
GCTGGTACCGACGCCGGACGGCGACGGTCGTCGCGCCTGTCTCGAAATCATGATCAACACCCCGCTGATGTCGGACCTGA
TCCGCAAAGGCGAAGTACACAAAATGAAAGAGCTGATGAAACGCTCCATCGAACAGGGTATGCAGACTTTCGACCAGGCC
CTGTACGAACTGTATGACCGCGGCGAAATCACCTACGAAGACGCCCTCGCTCACGCCGACTCCGCGAACGACCTGCGCCT
GATGATCAAGCTCAAGTCGGAGTCCGACGCCGAGTACCTCAACAGCGCCGCCGACGAACTGAGCCTGGCCGGCGACAACG
ACAACAACAGCGGCCCGCAGCTGTATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
75.2 |
98.168 |
0.738 |
| pilU | Acinetobacter baylyi ADP1 |
66.387 |
93.455 |
0.62 |
| pilU | Vibrio cholerae strain A1552 |
55.899 |
93.194 |
0.521 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.133 |
88.743 |
0.401 |
| pilT | Legionella pneumophila strain Lp02 |
42.687 |
87.696 |
0.374 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.687 |
87.696 |
0.374 |
| pilT | Pseudomonas aeruginosa PAK |
41.194 |
87.696 |
0.361 |
| pilT | Acinetobacter nosocomialis M2 |
41.194 |
87.696 |
0.361 |
| pilT | Acinetobacter baumannii D1279779 |
41.194 |
87.696 |
0.361 |
| pilT | Acinetobacter baumannii strain A118 |
41.194 |
87.696 |
0.361 |