Detailed information NTG0217447

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: CXB69_RS00125
• Genome accession: NZ_CP025206
• Coordinates: 23516..24562 (+)
• Length: 348 a.a.
• NCBI ID: WP_035145546.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain WiKim0074
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 18516..29562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXB69_RS00095 (CXB69_00095)	-	19540..19836 (+)	297	WP_025015729.1	DUF1507 family protein	-
CXB69_RS00100 (CXB69_00100)	-	19845..21032 (+)	1188	WP_025015730.1	FtsW/RodA/SpoVE family cell cycle protein	-
CXB69_RS00105 (CXB69_00105)	-	21043..22131 (+)	1089	WP_025015731.1	CAP-associated domain-containing protein	-
CXB69_RS00110 (CXB69_00110)	-	22155..22445 (+)	291	WP_016265218.1	YlbG family protein	-
CXB69_RS00115 (CXB69_00115)	rsmD	22450..23004 (+)	555	WP_112234018.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CXB69_RS00120 (CXB69_00120)	coaD	23017..23514 (+)	498	WP_025015732.1	pantetheine-phosphate adenylyltransferase	-
CXB69_RS00125 (CXB69_00125)	sepM	23516..24562 (+)	1047	WP_035145546.1	SepM family pheromone-processing serine protease	Regulator
CXB69_RS00130 (CXB69_00130)	comEA	24636..25343 (+)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
CXB69_RS00135 (CXB69_00135)	-	25401..25889 (+)	489	WP_011374770.1	ComE operon protein 2	-
CXB69_RS00140 (CXB69_00140)	comEC	26087..28153 (+)	2067	WP_231953244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CXB69_RS00145 (CXB69_00145)	holA	28150..29178 (+)	1029	WP_025015735.1	DNA polymerase III subunit delta	-
CXB69_RS00150 (CXB69_00150)	rpsT	29246..29500 (-)	255	WP_011374767.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38125.90 Da
• Isoelectric Point: 9.5178

>NTDB_id=217447 CXB69_RS00125 WP_035145546.1 23516..24562(+) (sepM) [Latilactobacillus sakei strain WiKim0074]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLDNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPGTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=217447 CXB69_RS00125 WP_035145546.1 23516..24562(+) (sepM) [Latilactobacillus sakei strain WiKim0074]
ATGCCCAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACAGTTGGTGTCAGAGGCCCAGTAACACCATTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGACAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAGTTACCAGGCACGCATCATCCAGGTCTTGGGATTACGT
TAACCGATCACTCTAAGATTGAGACTGATATTCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (221-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443