Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BZ167_RS20495 Genome accession   NZ_CP019626
Coordinates   1646660..1646824 (-) Length   54 a.a.
NCBI ID   WP_269195032.1    Uniprot ID   -
Organism   Bacillus sp. 275     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1641660..1651824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZ167_RS20495 comS 1646660..1646824 (-) 165 WP_269195032.1 competence protein ComS Regulator
  BZ167_RS20500 srfAB 1646889..1649933 (-) 3045 Protein_1531 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6180.18 Da        Isoelectric Point: 12.0559

>NTDB_id=217393 BZ167_RS20495 WP_269195032.1 1646660..1646824(-) (comS) [Bacillus sp. 275]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=217393 BZ167_RS20495 WP_269195032.1 1646660..1646824(-) (comS) [Bacillus sp. 275]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment