Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BZ167_RS03920 Genome accession   NZ_CP019626
Coordinates   892044..892997 (-) Length   317 a.a.
NCBI ID   WP_015417205.1    Uniprot ID   -
Organism   Bacillus sp. 275     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 887044..897997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZ167_RS03890 (BZ167_03910) - 887198..888184 (-) 987 WP_012117279.1 ABC transporter ATP-binding protein -
  BZ167_RS03895 (BZ167_03915) - 888358..889143 (-) 786 WP_061890534.1 DUF2268 domain-containing protein -
  BZ167_RS03900 (BZ167_03920) fabF 889226..890464 (-) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  BZ167_RS03905 (BZ167_03925) - 890487..891425 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BZ167_RS03910 (BZ167_03930) - 891593..891811 (+) 219 WP_007409123.1 hypothetical protein -
  BZ167_RS03915 (BZ167_03935) comZ 891840..892031 (-) 192 WP_061861349.1 ComZ family protein Regulator
  BZ167_RS03920 (BZ167_03940) med 892044..892997 (-) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  BZ167_RS03925 (BZ167_03945) - 893087..893653 (-) 567 WP_015417204.1 NAD(P) binding enzyme -
  BZ167_RS03930 (BZ167_03950) - 893736..894470 (-) 735 WP_015417203.1 hypothetical protein -
  BZ167_RS03940 (BZ167_03960) - 894731..894916 (+) 186 WP_007409129.1 YjzD family protein -
  BZ167_RS03945 (BZ167_03965) - 894954..895133 (-) 180 WP_003155070.1 YjzC family protein -
  BZ167_RS03950 (BZ167_03970) argF 895209..896180 (-) 972 WP_031378491.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35328.96 Da        Isoelectric Point: 4.6686

>NTDB_id=217333 BZ167_RS03920 WP_015417205.1 892044..892997(-) (med) [Bacillus sp. 275]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=217333 BZ167_RS03920 WP_015417205.1 892044..892997(-) (med) [Bacillus sp. 275]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782

Multiple sequence alignment