Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   CWI64_RS07835 Genome accession   NZ_CP025076
Coordinates   1452998..1453438 (-) Length   146 a.a.
NCBI ID   WP_000861967.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain BHN97x     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447998..1458438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI64_RS07805 (CWI64_07805) - 1448259..1449545 (+) 1287 WP_000278869.1 response regulator transcription factor -
  CWI64_RS07810 (CWI64_07810) - 1449597..1450130 (+) 534 WP_000729031.1 hypothetical protein -
  CWI64_RS07815 (CWI64_07815) nrdI 1450208..1450678 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  CWI64_RS07825 (CWI64_07825) - 1450971..1452233 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  CWI64_RS07830 (CWI64_07830) - 1452543..1453001 (-) 459 WP_000745055.1 DUF3021 domain-containing protein -
  CWI64_RS07835 (CWI64_07835) brsR 1452998..1453438 (-) 441 WP_000861967.1 LytTR family DNA-binding domain-containing protein Regulator
  CWI64_RS07845 (CWI64_07845) - 1454022..1454888 (+) 867 WP_000537006.1 helix-turn-helix transcriptional regulator -
  CWI64_RS12330 - 1455041..1455169 (+) 129 WP_001257107.1 hypothetical protein -
  CWI64_RS07850 (CWI64_07850) - 1455225..1455782 (+) 558 WP_000358739.1 phosphopantothenate--cysteine ligase family flavoprotein -
  CWI64_RS07855 (CWI64_07855) - 1456003..1457109 (+) 1107 WP_000608717.1 pyridoxal-dependent decarboxylase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17151.84 Da        Isoelectric Point: 5.9797

>NTDB_id=217333 CWI64_RS07835 WP_000861967.1 1452998..1453438(-) (brsR) [Streptococcus pneumoniae strain BHN97x]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLIEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=217333 CWI64_RS07835 WP_000861967.1 1452998..1453438(-) (brsR) [Streptococcus pneumoniae strain BHN97x]
ATGAAAGTAGAATTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
TCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGATAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.735

100

0.37

Multiple sequence alignment