Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BZ167_RS02445 Genome accession   NZ_CP019626
Coordinates   622565..623029 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus sp. 275     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 617565..628029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZ167_RS02420 (BZ167_02425) - 618071..618619 (-) 549 WP_031378778.1 hypothetical protein -
  BZ167_RS02425 (BZ167_02430) fadH 618733..619497 (-) 765 WP_061861423.1 2,4-dienoyl-CoA reductase -
  BZ167_RS02430 (BZ167_02435) - 619642..620505 (+) 864 WP_060675295.1 metallophosphoesterase -
  BZ167_RS02435 (BZ167_02440) - 620580..621074 (+) 495 WP_088462390.1 L,D-transpeptidase family protein -
  BZ167_RS02440 (BZ167_02445) - 621150..622442 (+) 1293 WP_015239757.1 MFS transporter -
  BZ167_RS02445 (BZ167_02450) kre 622565..623029 (+) 465 WP_003154622.1 YkyB family protein Regulator
  BZ167_RS02450 (BZ167_02455) cheV 623072..623983 (-) 912 WP_039251615.1 chemotaxis protein CheV -
  BZ167_RS20280 - 624172..624333 (+) 162 WP_007409608.1 hypothetical protein -
  BZ167_RS02460 (BZ167_02465) - 624534..625703 (+) 1170 WP_015417364.1 aminotransferase A -
  BZ167_RS02465 (BZ167_02470) - 625728..627548 (-) 1821 WP_015417363.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=217325 BZ167_RS02445 WP_003154622.1 622565..623029(+) (kre) [Bacillus sp. 275]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=217325 BZ167_RS02445 WP_003154622.1 622565..623029(+) (kre) [Bacillus sp. 275]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment