Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SAV_RS03630 Genome accession   NC_002758
Coordinates   732494..733168 (+) Length   224 a.a.
NCBI ID   WP_001166501.1    Uniprot ID   Q932F1
Organism   Staphylococcus aureus subsp. aureus Mu50     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 727494..738168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAV_RS03600 (SAV0654) - 727709..728776 (+) 1068 WP_000980137.1 membrane protein -
  SAV_RS03605 (SAV0655) - 728927..729970 (+) 1044 WP_001030775.1 alpha/beta hydrolase -
  SAV_RS03615 (SAV0656) - 730299..730727 (+) 429 WP_000198504.1 hypothetical protein -
  SAV_RS03620 (SAV0657) - 730936..731442 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SAV_RS03625 (SAV0658) graX 731555..732478 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  SAV_RS03630 (SAV0659) braR 732494..733168 (+) 675 WP_001166501.1 response regulator transcription factor GraR/ApsR Regulator
  SAV_RS03635 (SAV0660) graS 733161..734201 (+) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  SAV_RS03640 (SAV0661) vraF 734345..735106 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SAV_RS03645 (SAV0662) vraG 735096..736985 (+) 1890 WP_000143615.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26038.85 Da        Isoelectric Point: 4.3563

>NTDB_id=21676 SAV_RS03630 WP_001166501.1 732494..733168(+) (braR) [Staphylococcus aureus subsp. aureus Mu50]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVSRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=21676 SAV_RS03630 WP_001166501.1 732494..733168(+) (braR) [Staphylococcus aureus subsp. aureus Mu50]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAGTCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q932F1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment