Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CWI26_RS05845 Genome accession   NZ_CP025043
Coordinates   1182948..1183613 (-) Length   221 a.a.
NCBI ID   WP_029176725.1    Uniprot ID   -
Organism   Streptococcus suis strain AH681     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1177948..1188613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS05815 (CWI26_05815) - 1177953..1178228 (+) 276 WP_228477719.1 SatD family protein -
  CWI26_RS05820 (CWI26_05820) - 1178195..1178527 (+) 333 Protein_1069 DUF3307 domain-containing protein -
  CWI26_RS05825 (CWI26_05825) - 1178592..1178924 (+) 333 WP_228477720.1 adenylyl-sulfate kinase -
  CWI26_RS05830 (CWI26_05830) xerS 1179291..1180361 (+) 1071 WP_100881375.1 tyrosine recombinase XerS Machinery gene
  CWI26_RS05835 (CWI26_05835) - 1180425..1181933 (-) 1509 WP_100881376.1 phosphomannomutase/phosphoglucomutase -
  CWI26_RS05840 (CWI26_05840) - 1182010..1182951 (-) 942 WP_100881377.1 sensor histidine kinase -
  CWI26_RS05845 (CWI26_05845) braR 1182948..1183613 (-) 666 WP_029176725.1 response regulator transcription factor Regulator
  CWI26_RS05850 (CWI26_05850) - 1183655..1183921 (-) 267 WP_024405694.1 type II toxin-antitoxin system RelE family toxin -
  CWI26_RS05855 (CWI26_05855) relB 1183905..1184156 (-) 252 WP_029176726.1 type II toxin-antitoxin system RelB family antitoxin -
  CWI26_RS05860 (CWI26_05860) - 1184248..1186218 (-) 1971 WP_100881378.1 ABC transporter permease -
  CWI26_RS05865 (CWI26_05865) - 1186219..1186971 (-) 753 WP_100881379.1 ABC transporter ATP-binding protein -
  CWI26_RS05870 (CWI26_05870) - 1186980..1187375 (-) 396 WP_100881380.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  CWI26_RS05875 (CWI26_05875) - 1187388..1187528 (-) 141 WP_032499492.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25405.14 Da        Isoelectric Point: 4.7736

>NTDB_id=216615 CWI26_RS05845 WP_029176725.1 1182948..1183613(-) (braR) [Streptococcus suis strain AH681]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSELSIDQFQLSLDGRFSNESDQVQLSPTETKILS
ALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFDRIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=216615 CWI26_RS05845 WP_029176725.1 1182948..1183613(-) (braR) [Streptococcus suis strain AH681]
ATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAACATTTAGGCAAATCTTA
TCAGGTAGAAAGTGTTCAGAATTTCCGAGCAGTTAGTCAGGAAGTTGCGGAAATCAAACCAGACTTAGTGCTGATGGACA
TTAGCCTGCCTTATTACAACGGTTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCT
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTTTCCAAGCCCTTTTCTCTGGG
GATTTTGGATGCCAAAATCGGAGCCTTCTTGCGTCGGGTTAATCAATTCAGCAAATCGAGCGAATTGTCTATCGACCAGT
TCCAGCTTAGTTTGGACGGGCGATTTTCAAACGAATCGGATCAGGTTCAATTATCTCCAACAGAAACCAAGATTTTGTCC
GCCTTGCTAGAAAGACAAGGGCAGATTGTCAGCAAGGAAGAACTTTTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
CCAGAATACGCTCAATGTCAACATGACTCGTCTGCGTAAGAAGGTGAGCGAAGTGGGATTTGACCGTATTCATACTGTTC
GTGGTGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.548

0.471

Multiple sequence alignment