Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   CWI26_RS03020 Genome accession   NZ_CP025043
Coordinates   590309..591043 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain AH681     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 585309..596043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS02995 (CWI26_02995) - 585809..586117 (-) 309 WP_002938710.1 DUF1827 family protein -
  CWI26_RS03000 (CWI26_03000) - 586172..586633 (-) 462 WP_002938708.1 NUDIX hydrolase -
  CWI26_RS03005 (CWI26_03005) clpE 586819..589047 (-) 2229 WP_099780174.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  CWI26_RS03010 (CWI26_03010) - 589271..589501 (+) 231 WP_002938704.1 DUF1797 family protein -
  CWI26_RS03015 (CWI26_03015) - 589627..590316 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  CWI26_RS03020 (CWI26_03020) amiE 590309..591043 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  CWI26_RS03025 (CWI26_03025) - 591173..592021 (+) 849 WP_024378968.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  CWI26_RS03030 (CWI26_03030) - 592264..592404 (+) 141 WP_079267632.1 YSIRK-type signal peptide-containing protein -
  CWI26_RS03035 (CWI26_03035) - 592364..592930 (+) 567 WP_158293390.1 hypothetical protein -
  CWI26_RS03040 (CWI26_03040) - 592984..593676 (+) 693 WP_024409756.1 hypothetical protein -
  CWI26_RS03045 (CWI26_03045) - 593929..594630 (-) 702 WP_015647212.1 CPBP family intramembrane glutamic endopeptidase -
  CWI26_RS03050 (CWI26_03050) scnR 594859..595509 (+) 651 WP_024376704.1 response regulator transcription factor Regulator

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=216600 CWI26_RS03020 WP_002943067.1 590309..591043(+) (amiE) [Streptococcus suis strain AH681]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=216600 CWI26_RS03020 WP_002943067.1 590309..591043(+) (amiE) [Streptococcus suis strain AH681]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTTGTTATTATCGGTCCATCTGGGTCAGGGAAATCGACTTTCTTACGTACAATGAATCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCAAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CAAATGCCTATCCACAAAGTCTTTCAGGTGGTCAGCAACAGCGGATCGCTATTGCACGTGGTCTGGCTATGGACCCAGAT
GTCCTGCTTTTTGATGAACCGACCTCTGCACTAGATCCTGAAATGGTTGGAGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365