Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CWI26_RS02800 Genome accession   NZ_CP025043
Coordinates   544824..545600 (+) Length   258 a.a.
NCBI ID   WP_099876655.1    Uniprot ID   -
Organism   Streptococcus suis strain AH681     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 539824..550600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS02775 (CWI26_02775) - 540050..540256 (+) 207 WP_002941576.1 hypothetical protein -
  CWI26_RS02780 (CWI26_02780) - 540210..541562 (+) 1353 WP_100881188.1 IS66-like element short variant transposase -
  CWI26_RS02785 (CWI26_02785) - 541650..542906 (-) 1257 WP_100881034.1 ISL3 family transposase -
  CWI26_RS11960 - 542973..543147 (-) 175 Protein_482 transposase -
  CWI26_RS02795 (CWI26_02795) rlmD 543434..544786 (-) 1353 WP_100881190.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  CWI26_RS02800 (CWI26_02800) recX 544824..545600 (+) 777 WP_099876655.1 recombination regulator RecX Regulator
  CWI26_RS02805 (CWI26_02805) - 545676..546209 (+) 534 WP_024375910.1 DUF402 domain-containing protein -
  CWI26_RS02810 (CWI26_02810) - 546267..546584 (+) 318 WP_002942715.1 DUF960 domain-containing protein -
  CWI26_RS02815 (CWI26_02815) - 546684..547415 (+) 732 WP_002942716.1 GntR family transcriptional regulator -
  CWI26_RS02820 (CWI26_02820) - 547555..548265 (-) 711 WP_044688168.1 GntR family transcriptional regulator -
  CWI26_RS02825 (CWI26_02825) - 548487..550259 (+) 1773 WP_100881191.1 glycoside hydrolase family 35 protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30561.17 Da        Isoelectric Point: 9.3979

>NTDB_id=216598 CWI26_RS02800 WP_099876655.1 544824..545600(+) (recX) [Streptococcus suis strain AH681]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDENYVDSYVRQNALNGDKGPAMIRQKLMQKGISKLLIDKRLAEEDFSELARKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDALIAKELDKQYRKYSRKYEGYELKQRLIQAL
VRKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=216598 CWI26_RS02800 WP_099876655.1 544824..545600(+) (recX) [Streptococcus suis strain AH681]
ATGAGAATTACAAAAATTGAAAAAAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAATAATATTGTCAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGAGAA
TTATGTTGATAGCTATGTTCGTCAGAATGCTTTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTTCTAAACTGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGTTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGCCTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTA
GTTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368