Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   SA_RS11120 Genome accession   NC_002745
Coordinates   2186360..2186830 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus subsp. aureus N315     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2181360..2191830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA_RS11100 (SA1932) coaW 2181668..2182471 (+) 804 WP_000862728.1 type II pantothenate kinase -
  SA_RS11105 (SA1933) - 2182602..2183273 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  SA_RS11110 (SA1934) ldmS 2183672..2184865 (-) 1194 WP_000183717.1 L-aspartate--L-methionine ligase LdmS -
  SA_RS11115 (SA1935) - 2184865..2186049 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  SA_RS11120 (SA1936) luxS 2186360..2186830 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  SA_RS11125 (SA1937) - 2186982..2187332 (-) 351 WP_001024035.1 DoxX family protein -
  SA_RS11130 (SA1938) - 2187346..2188647 (-) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  SA_RS11140 (SA1939) deoC 2188926..2189588 (-) 663 WP_001083318.1 deoxyribose-phosphate aldolase -
  SA_RS11145 (SA1940) deoD 2189902..2190612 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  SA_RS11150 (SA1941) - 2190733..2191176 (-) 444 WP_000070866.1 Dps family protein -
  SA_RS11155 (SA1942) - 2191376..2191789 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=21659 SA_RS11120 WP_000164421.1 2186360..2186830(+) (luxS) [Staphylococcus aureus subsp. aureus N315]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=21659 SA_RS11120 WP_000164421.1 2186360..2186830(+) (luxS) [Staphylococcus aureus subsp. aureus N315]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment