Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMA_RS08480 Genome accession   NC_003116
Coordinates   1613639..1614100 (+) Length   153 a.a.
NCBI ID   WP_002235024.1    Uniprot ID   Q9JTP4
Organism   Neisseria meningitidis Z2491     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1608639..1619100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS08455 (NMA1685) - 1609774..1609983 (-) 210 WP_002212949.1 tautomerase family protein -
  NMA_RS08460 (NMA1686) - 1610328..1611134 (+) 807 WP_002246994.1 DUF4198 domain-containing protein -
  NMA_RS08465 (NMA1687) - 1611192..1612457 (-) 1266 WP_002246995.1 Glu/Leu/Phe/Val family dehydrogenase -
  NMA_RS08475 (NMA1688) - 1612864..1613571 (+) 708 WP_002241765.1 phosphoglycolate phosphatase -
  NMA_RS08480 (NMA1689) recX 1613639..1614100 (+) 462 WP_002235024.1 recombination regulator RecX Regulator
  NMA_RS14330 - 1614174..1614335 (+) 162 WP_002239941.1 hypothetical protein -
  NMA_RS08495 (NMA1691) - 1614488..1614970 (+) 483 WP_002212937.1 acyl-CoA thioesterase -
  NMA_RS08500 (NMA1692) - 1615331..1616578 (-) 1248 WP_010981224.1 M23 family metallopeptidase -
  NMA_RS08505 (NMA1693) surE 1616681..1617427 (-) 747 WP_002246284.1 5'/3'-nucleotidase SurE -
  NMA_RS08510 (NMA1694) - 1617444..1619000 (-) 1557 WP_002246285.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17716.09 Da        Isoelectric Point: 10.0960

>NTDB_id=21657 NMA_RS08480 WP_002235024.1 1613639..1614100(+) (recX) [Neisseria meningitidis Z2491]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=21657 NMA_RS08480 WP_002235024.1 1613639..1614100(+) (recX) [Neisseria meningitidis Z2491]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9JTP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967

Multiple sequence alignment