Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CWQ20_RS02720 Genome accession   NZ_CP025029
Coordinates   446285..447061 (-) Length   258 a.a.
NCBI ID   WP_000704976.1    Uniprot ID   Q3K2X2
Organism   Streptococcus agalactiae strain SGEHI2015-25     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 441285..452061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWQ20_RS02715 (CWQ20_02715) - 445668..446201 (-) 534 WP_001239184.1 nucleoside tri-diphosphate phosphatase -
  CWQ20_RS02720 (CWQ20_02720) recX 446285..447061 (-) 777 WP_000704976.1 recombination regulator RecX Regulator
  CWQ20_RS02725 (CWQ20_02725) rlmD 447160..448515 (+) 1356 WP_001103616.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  CWQ20_RS02730 (CWQ20_02730) - 448784..449548 (+) 765 WP_000586353.1 nucleoside phosphorylase -
  CWQ20_RS02735 (CWQ20_02735) - 449582..450010 (+) 429 WP_000267398.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30745.65 Da        Isoelectric Point: 9.7605

>NTDB_id=216488 CWQ20_RS02720 WP_000704976.1 446285..447061(-) (recX) [Streptococcus agalactiae strain SGEHI2015-25]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKELIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKFSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=216488 CWQ20_RS02720 WP_000704976.1 446285..447061(-) (recX) [Streptococcus agalactiae strain SGEHI2015-25]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAGTTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATATGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAACTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAATTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAACAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGCGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTCTCAAAAAAATATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q3K2X2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

37.931

100

0.384

Multiple sequence alignment