Detailed information    

insolico Bioinformatically predicted

Overview

Name   tpc   Type   Machinery gene
Locus tag   NMA_RS04495 Genome accession   NC_003116
Coordinates   866932..867930 (-) Length   332 a.a.
NCBI ID   WP_002214152.1    Uniprot ID   X5F838
Organism   Neisseria meningitidis Z2491     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 861932..872930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS04475 (NMA0890) - 863413..864039 (-) 627 WP_002246057.1 phosphoribosylanthranilate isomerase -
  NMA_RS04480 (NMA0891) greB 864098..864589 (-) 492 WP_002236813.1 transcription elongation factor GreB -
  NMA_RS04485 (NMA0892) purF 864689..866233 (-) 1545 WP_002236814.1 amidophosphoribosyltransferase -
  NMA_RS04490 (NMA0894) - 866442..866939 (-) 498 WP_002237644.1 CvpA family protein -
  NMA_RS04495 (NMA0895) tpc 866932..867930 (-) 999 WP_002214152.1 cell division protein FtsN Machinery gene
  NMA_RS04500 (NMA0896) folC 867943..869217 (-) 1275 WP_002246857.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  NMA_RS04505 (NMA0897) - 869249..869689 (-) 441 WP_002221266.1 protein YgfX -
  NMA_RS04510 (NMA0899) - 869694..870053 (-) 360 WP_002221265.1 hypothetical protein -
  NMA_RS04515 (NMA0900) - 870126..870854 (-) 729 WP_002217681.1 amino acid ABC transporter ATP-binding protein -
  NMA_RS04525 (NMA0902) rsmA 871027..871806 (-) 780 WP_002229195.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  NMA_RS04530 (NMA0903) - 872003..872692 (+) 690 WP_002226537.1 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 332 a.a.        Molecular weight: 35520.89 Da        Isoelectric Point: 10.1759

>NTDB_id=21639 NMA_RS04495 WP_002214152.1 866932..867930(-) (tpc) [Neisseria meningitidis Z2491]
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=21639 NMA_RS04495 WP_002214152.1 866932..867930(-) (tpc) [Neisseria meningitidis Z2491]
ATGTCCGAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGACCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGGTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAGGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains

Predicted by InterproScan.

SPOR domain (SPOR)

(259-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5F838

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.884

100

0.937

Multiple sequence alignment