Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   NMA_RS03415 Genome accession   NC_003116
Coordinates   661393..663435 (+) Length   680 a.a.
NCBI ID   WP_002246395.1    Uniprot ID   -
Organism   Neisseria meningitidis Z2491     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 656393..668435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS03390 (NMA0669) - 657199..657374 (+) 176 Protein_640 response regulator -
  NMA_RS03395 (NMA0670) - 657370..658620 (+) 1251 WP_002246396.1 ATP-binding protein -
  NMA_RS15030 - 658746..658844 (+) 99 Protein_642 sensor histidine kinase -
  NMA_RS03400 (NMA0672) rng 658879..660372 (-) 1494 WP_002214463.1 ribonuclease G -
  NMA_RS03405 (NMA0673) grxC 660586..660843 (+) 258 WP_002214462.1 glutaredoxin 3 -
  NMA_RS03410 (NMA0674) secB 660864..661307 (+) 444 WP_002226664.1 protein-export chaperone SecB -
  NMA_RS03415 (NMA0675) recG 661393..663435 (+) 2043 WP_002246395.1 ATP-dependent DNA helicase RecG Machinery gene
  NMA_RS14200 - 664427..664543 (+) 117 Protein_647 IS5/IS1182 family transposase -
  NMA_RS03420 (NMA0676) argC 664694..665737 (-) 1044 WP_002232978.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  NMA_RS03425 (NMA0677) - 665734..666027 (-) 294 WP_002214458.1 hypothetical protein -
  NMA_RS03440 (NMA0679) - 666395..667543 (+) 1149 Protein_650 JmjC domain-containing protein -
  NMA_RS14530 (NMA0680) - 667552..667779 (+) 228 WP_002234251.1 hypothetical protein -
  NMA_RS03450 (NMA0681) - 667772..668125 (+) 354 WP_003704890.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74873.95 Da        Isoelectric Point: 8.0873

>NTDB_id=21637 NMA_RS03415 WP_002246395.1 661393..663435(+) (recG) [Neisseria meningitidis Z2491]
MMSPETRKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAIGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=21637 NMA_RS03415 WP_002246395.1 661393..663435(+) (recG) [Neisseria meningitidis Z2491]
ATGATGTCGCCCGAAACCCGAAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGTCAGGTCGAGGGGGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGGCTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGATCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTGGCTGCTTTGTCTGCTTTGACGGCTATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTGGCTGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAATATCCGCGGCCCGGGCGAGTTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAACTCGAAGAA
GACCTGCACCTTTTGGAACAGGCGCGCGAAACCGCCCCGATGCTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

RecG wedge domain (RecG_wedge)

(15-164)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

99.853

100

0.999

Multiple sequence alignment