Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BZG42_RS08090 Genome accession   NZ_CP019557
Coordinates   1710948..1711682 (-) Length   244 a.a.
NCBI ID   WP_155995786.1    Uniprot ID   -
Organism   Streptococcus sp. DAT741     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1705948..1716682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS08060 (BZG42_08120) - 1706032..1706328 (-) 297 WP_024531898.1 YlxR family protein -
  BZG42_RS08065 (BZG42_08125) nusA 1706345..1707487 (-) 1143 WP_024531897.1 transcription termination factor NusA -
  BZG42_RS08070 (BZG42_08130) rimP 1707567..1708037 (-) 471 WP_155995790.1 ribosome maturation factor RimP -
  BZG42_RS08075 (BZG42_08135) trmB 1708429..1709064 (-) 636 WP_024531895.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BZG42_RS08080 (BZG42_08140) - 1709061..1709855 (-) 795 WP_024531894.1 phosphotransferase family protein -
  BZG42_RS08085 (BZG42_08145) - 1709905..1710951 (-) 1047 WP_155995788.1 ABC transporter permease -
  BZG42_RS08090 (BZG42_08150) pptA 1710948..1711682 (-) 735 WP_155995786.1 ABC transporter ATP-binding protein Regulator
  BZG42_RS08095 (BZG42_08155) - 1711745..1712158 (+) 414 WP_120172162.1 HIT family protein -
  BZG42_RS08100 (BZG42_08160) - 1712160..1712453 (+) 294 WP_120172164.1 chemotaxis protein -
  BZG42_RS08105 (BZG42_08165) - 1712503..1713699 (-) 1197 WP_024531889.1 LCP family protein -
  BZG42_RS08110 (BZG42_08170) - 1713696..1714223 (-) 528 WP_155995784.1 GNAT family N-acetyltransferase -
  BZG42_RS08115 (BZG42_08175) tsaE 1714216..1714656 (-) 441 WP_029187388.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BZG42_RS08120 (BZG42_08180) - 1714888..1716552 (-) 1665 WP_024531886.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27207.54 Da        Isoelectric Point: 4.4958

>NTDB_id=216232 BZG42_RS08090 WP_155995786.1 1710948..1711682(-) (pptA) [Streptococcus sp. DAT741]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQILIDGQSLTQDTEHYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLNWEQAWNRAERLLNIFRLDEKLDWFPVHFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAIADLLALLEEEKAKGTSILMSTHVLDSAEKMCDRFVILHQGQVRAAGNLAELQATFAMEEASLSDIYLALTQE
GVVR

Nucleotide


Download         Length: 735 bp        

>NTDB_id=216232 BZG42_RS08090 WP_155995786.1 1710948..1711682(-) (pptA) [Streptococcus sp. DAT741]
ATGTTAGAAGTAAAAAATGTCACAGGTGGCTATGTAAATATCCCTGTCTTGAAAGATGTATCTTTTACAGTTGAAGATGG
ACAGTTGGTCGGCTTAATCGGTCTTAATGGTGCTGGAAAATCAACTACCATAAAAGAAATTATCGGCCTTTTGACACCCT
ATCAAGGACAGATTTTGATTGATGGCCAAAGCCTGACACAGGATACAGAACATTATCGAAAAAAGATTGGTTTTATCCCA
GAAACGCCTAGTTTATACGAGGAGCTAACTCTCAAAGAACATTTGGAAGTTGTTGCTATGGCTTATGATTTGAATTGGGA
GCAGGCTTGGAACCGAGCAGAACGGTTGCTGAATATTTTTCGTCTGGACGAAAAGTTGGATTGGTTCCCTGTTCATTTTT
CAAAAGGAATGAAGCAAAAAGTGATGATTATCTGTGCATTTATGGTAGAACCAAGCCTGTTGATCGTTGACGAGCCTTTT
TTAGGTTTGGATCCGGTAGCTATTGCCGATTTGCTTGCTCTCCTAGAGGAAGAAAAAGCAAAGGGAACTTCTATCTTGAT
GTCAACGCATGTTCTGGATTCGGCTGAAAAAATGTGTGATCGGTTTGTTATTCTCCACCAAGGGCAGGTACGAGCAGCTG
GAAATTTGGCTGAGCTACAGGCAACTTTTGCTATGGAAGAGGCCAGTCTCAGTGATATTTATCTTGCCTTGACGCAAGAG
GGAGTGGTCAGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.222

97.951

0.717
  pptA Streptococcus thermophilus LMD-9

72.385

97.951

0.709

Multiple sequence alignment