Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CFP59_RS25800 | Genome accession | NZ_CP025018 |
| Coordinates | 6163274..6165799 (+) | Length | 841 a.a. |
| NCBI ID | WP_069860863.1 | Uniprot ID | A0A9X2M1A3 |
| Organism | Streptomyces sp. M56 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 6158274..6170799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFP59_RS25765 (CFP59_05083) | - | 6159373..6160188 (+) | 816 | WP_079152807.1 | hypothetical protein | - |
| CFP59_RS25770 (CFP59_05084) | - | 6160310..6160492 (+) | 183 | WP_069860868.1 | hypothetical protein | - |
| CFP59_RS25775 (CFP59_05085) | - | 6160704..6161099 (+) | 396 | WP_079258096.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CFP59_RS25780 (CFP59_05086) | - | 6161122..6161643 (+) | 522 | WP_069860866.1 | amino-acid N-acetyltransferase | - |
| CFP59_RS25785 (CFP59_05087) | - | 6161864..6162199 (+) | 336 | WP_069860865.1 | Lsr2 family protein | - |
| CFP59_RS25790 (CFP59_05088) | - | 6162205..6162798 (-) | 594 | WP_069860864.1 | SCO3374 family protein | - |
| CFP59_RS25800 (CFP59_05089) | clpC | 6163274..6165799 (+) | 2526 | WP_069860863.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| CFP59_RS25805 (CFP59_05090) | - | 6166017..6168473 (-) | 2457 | WP_100806893.1 | NACHT domain-containing protein | - |
| CFP59_RS25815 (CFP59_05091) | - | 6168961..6169224 (-) | 264 | WP_100806894.1 | hypothetical protein | - |
| CFP59_RS25820 (CFP59_05092) | - | 6169232..6170161 (-) | 930 | WP_100806895.1 | hypothetical protein | - |
| CFP59_RS51900 | - | 6170245..6170376 (-) | 132 | WP_269462905.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 93142.41 Da Isoelectric Point: 5.6648
>NTDB_id=216096 CFP59_RS25800 WP_069860863.1 6163274..6165799(+) (clpC) [Streptomyces sp. M56]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDEELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLT
ETDIIQIVDLMIDKVDERLKDRDMGIELSGEAKKLLAKRGYDPVLGARPLRRTIQREVEDVLSEKILFGELRPGHIVVVD
TEGEGEEKKFTFRGEEKSALPDTPPIESAAGGAGPNLSKEA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDEELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
TLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLT
ETDIIQIVDLMIDKVDERLKDRDMGIELSGEAKKLLAKRGYDPVLGARPLRRTIQREVEDVLSEKILFGELRPGHIVVVD
TEGEGEEKKFTFRGEEKSALPDTPPIESAAGGAGPNLSKEA
Nucleotide
Download Length: 2526 bp
>NTDB_id=216096 CFP59_RS25800 WP_069860863.1 6163274..6165799(+) (clpC) [Streptomyces sp. M56]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAACACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGTACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAGGCCGCCACCGCCGGCGGCCCGGCGGAGGGCACT
CCCTCCACCTCGCTCGTCCTGGACCAGTTCGGCCGCAATCTCACCCAGGCCGCCCGCGAATCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTCTCGCGCCGCACCAAGAACAACCCGGTCCTCATCGGCGAGC
CCGGCGTCGGCAAGACGGCGGTCGTCGAGGGACTGGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTGGGCGCCCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTGCTCAAGGAGATTCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGTGCCG
CCGAGGGCGCGATCGACGCCGCGAGCATCCTCAAGCCGATGCTGGCGCGGGGCGAGCTCCAGACCATCGGCGCCACGACG
CTCGACGAGTACCGCAAGTACCTGGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCCGAGCCGTC
GCTGCCCCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTCTCGATCACGGACTCGG
CCCTGGTCGCGGCCGCCACCCTGGCCGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGGATCCGCCGTATGACCGCACCGCCGGACCTGCGCGAATTCGACGAGAAGATCGCCGATGT
GCGCCGGGAGAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGATGGCCGCGGGCCTGCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCGAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGAGGAGCTGATC
GCCGAGGTCCTGGCCACGGCCACCGGTATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCCCGGCTGCTGCGCATGGA
GGACGAGCTGCACAAGCGCGTCATCGGCCAGAAGGACGCCATCAAGGCGCTCTCCCAGGCCATCCGGCGTACGCGTGCGG
GCCTGAAGGACCCCAAGCGCCCCGGCGGCTCGTTCATCTTCGCGGGCCCGTCCGGTGTCGGTAAGACCGAGCTCAGCAAG
ACCCTCGCCGAGTTCCTCTTCGGCGACGAGGACGCGATGATCTCGCTCGACATGTCGGAGTTCAGCGAGAAGCACACCGT
CTCGCGGCTCTTCGGCTCCCCGCCCGGATACGTGGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTGGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTCCAGATCCTGGAGGAC
GGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTGATCATCATGACCACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGATGTGAAGACCGGCTACGAGCGGATGAAGGCCAAGG
TCAACGAGGAGCTGAAGCAGCACTTCCGCCCCGAGTTCCTGAACCGTGTCGATGACACCGTCGTCTTCCACCAGCTCACC
GAGACCGACATCATCCAGATCGTCGACCTCATGATCGACAAGGTGGACGAGCGGCTGAAGGACCGCGACATGGGCATCGA
GCTCAGTGGCGAGGCCAAGAAGCTGCTGGCCAAGCGGGGCTACGACCCGGTCCTGGGCGCCCGGCCGCTGCGCCGGACGA
TCCAGCGCGAGGTCGAGGACGTGCTCTCGGAGAAGATCCTCTTCGGCGAGCTGCGTCCGGGCCACATCGTGGTCGTGGAC
ACCGAGGGTGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCGCTGCCGGACACCCCGCCGATCGA
GTCCGCCGCCGGTGGCGCGGGCCCGAACCTGAGCAAGGAGGCGTGA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAACACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTCGGCCACAACTACATCGGTACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGATCTGAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAGGCCGCCACCGCCGGCGGCCCGGCGGAGGGCACT
CCCTCCACCTCGCTCGTCCTGGACCAGTTCGGCCGCAATCTCACCCAGGCCGCCCGCGAATCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTCTCGCGCCGCACCAAGAACAACCCGGTCCTCATCGGCGAGC
CCGGCGTCGGCAAGACGGCGGTCGTCGAGGGACTGGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTGGGCGCCCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTGCTCAAGGAGATTCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTGGTGGGTGCGGGTGCCG
CCGAGGGCGCGATCGACGCCGCGAGCATCCTCAAGCCGATGCTGGCGCGGGGCGAGCTCCAGACCATCGGCGCCACGACG
CTCGACGAGTACCGCAAGTACCTGGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCCGAGCCGTC
GCTGCCCCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTCTCGATCACGGACTCGG
CCCTGGTCGCGGCCGCCACCCTGGCCGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGGATCCGCCGTATGACCGCACCGCCGGACCTGCGCGAATTCGACGAGAAGATCGCCGATGT
GCGCCGGGAGAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGATGGCCGCGGGCCTGCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCGAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGAGGAGCTGATC
GCCGAGGTCCTGGCCACGGCCACCGGTATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCCCGGCTGCTGCGCATGGA
GGACGAGCTGCACAAGCGCGTCATCGGCCAGAAGGACGCCATCAAGGCGCTCTCCCAGGCCATCCGGCGTACGCGTGCGG
GCCTGAAGGACCCCAAGCGCCCCGGCGGCTCGTTCATCTTCGCGGGCCCGTCCGGTGTCGGTAAGACCGAGCTCAGCAAG
ACCCTCGCCGAGTTCCTCTTCGGCGACGAGGACGCGATGATCTCGCTCGACATGTCGGAGTTCAGCGAGAAGCACACCGT
CTCGCGGCTCTTCGGCTCCCCGCCCGGATACGTGGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTGGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTCCAGATCCTGGAGGAC
GGTCGGCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTGATCATCATGACCACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGATGTGAAGACCGGCTACGAGCGGATGAAGGCCAAGG
TCAACGAGGAGCTGAAGCAGCACTTCCGCCCCGAGTTCCTGAACCGTGTCGATGACACCGTCGTCTTCCACCAGCTCACC
GAGACCGACATCATCCAGATCGTCGACCTCATGATCGACAAGGTGGACGAGCGGCTGAAGGACCGCGACATGGGCATCGA
GCTCAGTGGCGAGGCCAAGAAGCTGCTGGCCAAGCGGGGCTACGACCCGGTCCTGGGCGCCCGGCCGCTGCGCCGGACGA
TCCAGCGCGAGGTCGAGGACGTGCTCTCGGAGAAGATCCTCTTCGGCGAGCTGCGTCCGGGCCACATCGTGGTCGTGGAC
ACCGAGGGTGAGGGTGAGGAGAAGAAGTTCACCTTCCGCGGCGAGGAGAAGTCGGCGCTGCCGGACACCCCGCCGATCGA
GTCCGCCGCCGGTGGCGCGGGCCCGAACCTGAGCAAGGAGGCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.845 |
95.363 |
0.59 |
| clpC | Streptococcus mutans UA159 |
44.337 |
98.692 |
0.438 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.789 |
95.838 |
0.429 |
| clpC | Streptococcus thermophilus LMD-9 |
42.857 |
99.881 |
0.428 |
| clpC | Streptococcus pneumoniae D39 |
44.209 |
95.482 |
0.422 |
| clpC | Streptococcus pneumoniae Rx1 |
44.209 |
95.482 |
0.422 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.236 |
94.887 |
0.42 |
| clpE | Streptococcus mutans UA159 |
53.514 |
74.435 |
0.398 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.572 |
75.624 |
0.39 |
| clpE | Streptococcus pneumoniae Rx1 |
51.572 |
75.624 |
0.39 |
| clpE | Streptococcus pneumoniae D39 |
51.572 |
75.624 |
0.39 |
| clpE | Streptococcus pneumoniae R6 |
51.572 |
75.624 |
0.39 |
| clpC | Streptococcus thermophilus LMG 18311 |
48.802 |
79.429 |
0.388 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.097 |
73.722 |
0.384 |