Detailed information NTG0216092

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BZG29_RS05510
• Genome accession: NZ_CP019510
• Coordinates: 1232612..1233670 (-)
• Length: 352 a.a.
• NCBI ID: WP_077399801.1
• Uniprot ID: -
• Organism: Janthinobacterium sp. LM6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1227612..1238670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BZG29_RS05480 (BZG29_05490)	-	1228306..1228653 (+)	348	WP_077399785.1	antibiotic biosynthesis monooxygenase	-
BZG29_RS05485 (BZG29_05495)	-	1228650..1229102 (-)	453	WP_077399788.1	hypothetical protein	-
BZG29_RS05490 (BZG29_05500)	-	1229281..1229547 (+)	267	WP_077399791.1	hypothetical protein	-
BZG29_RS05495 (BZG29_05505)	rpoH	1229638..1230537 (-)	900	WP_170846504.1	RNA polymerase sigma factor RpoH	-
BZG29_RS05500 (BZG29_05510)	ftsX	1230949..1231869 (-)	921	WP_077399795.1	permease-like cell division protein FtsX	-
BZG29_RS05505 (BZG29_05515)	-	1231866..1232603 (-)	738	WP_077399798.1	ATP-binding cassette domain-containing protein	-
BZG29_RS05510 (BZG29_05520)	pilA	1232612..1233670 (-)	1059	WP_077399801.1	signal recognition particle-docking protein FtsY	Machinery gene
BZG29_RS05515 (BZG29_05525)	-	1233835..1234812 (-)	978	WP_253192788.1	MerR family transcriptional regulator	-
BZG29_RS05520 (BZG29_05530)	-	1234979..1236292 (+)	1314	WP_077399807.1	FAD-dependent oxidoreductase	-
BZG29_RS05525 (BZG29_05535)	-	1236282..1237079 (+)	798	WP_077399810.1	DUF1365 domain-containing protein	-
BZG29_RS05530 (BZG29_05540)	-	1237154..1238317 (+)	1164	WP_077408970.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37358.63 Da
• Isoelectric Point: 6.8950

>NTDB_id=216092 BZG29_RS05510 WP_077399801.1 1232612..1233670(-) (pilA) [Janthinobacterium sp. LM6]
MFSFFKKKPIAPEAASAEPLVLPAATPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1059 bp

>NTDB_id=216092 BZG29_RS05510 WP_077399801.1 1232612..1233670(-) (pilA) [Janthinobacterium sp. LM6]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCATCAGCCGAGCCCCTCGTCCTTCCCGCCGCCACGCC
GCCTGCACCGCAGCCTGCCGCTACGCCCCTGAGCGGCGCACCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAACACCCTGTCCGTGCTGTTCGTCGGCGCG
AAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCGGACGCCGGCATCGACGCCACCGAATTCCT
GCTTACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCGGCCGCCGTCAAGGCCGCGCTGAAAGTGCTGC
TGATCGACCTGCTCTCGCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTG
AATGGCGCCGGCAAGACAACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGC
GGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAATTGATGGTCTGGGGCGAGCGCAACAACGTCACCGTGATTTCGCAGG
AATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTGATGGTCGAC
ACGGCGGGCCGCTTGCCGACGCAGTTGCACCTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
GGGCGCACCGCATGAAACCCTGCTTGTGATCGACGGCAACACGGGCCAGAATGCCCTCACGCAAGTGAAAGCATTCGACG
ATGCCCTGCAGCTGAGCGGCCTGGTAATCACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGCTGGCGGCGATCGCCCGC
GTGCGTCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (71-131)

• SRP54-type protein, GTPase domain (SRP54) (153-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.707	93.182	0.528