Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMB_RS07690 Genome accession   NC_003112
Coordinates   1528598..1529059 (+) Length   153 a.a.
NCBI ID   WP_002225089.1    Uniprot ID   Q9JYQ3
Organism   Neisseria meningitidis MC58     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1523598..1534059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMB_RS07665 (NMB1474) - 1524739..1524948 (-) 210 WP_002212949.1 tautomerase family protein -
  NMB_RS07670 (NMB1475) - 1525293..1526099 (+) 807 WP_002225093.1 DUF4198 domain-containing protein -
  NMB_RS07675 (NMB1476) - 1526157..1527422 (-) 1266 WP_002225092.1 Glu/Leu/Phe/Val family dehydrogenase -
  NMB_RS07685 (NMB1478) - 1527824..1528530 (+) 707 Protein_1497 phosphoglycolate phosphatase -
  NMB_RS07690 (NMB1479) recX 1528598..1529059 (+) 462 WP_002225089.1 recombination regulator RecX Regulator
  NMB_RS11365 (NMB1480) - 1529133..1529294 (+) 162 WP_002244178.1 hypothetical protein -
  NMB_RS07695 (NMB1482) - 1529447..1529929 (+) 483 WP_002225088.1 acyl-CoA thioesterase -
  NMB_RS07700 (NMB1483) - 1530290..1531537 (-) 1248 WP_002225087.1 M23 family metallopeptidase -
  NMB_RS07710 (NMB1484) surE 1531793..1532539 (-) 747 WP_002225086.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.07 Da        Isoelectric Point: 9.9314

>NTDB_id=21608 NMB_RS07690 WP_002225089.1 1528598..1529059(+) (recX) [Neisseria meningitidis MC58]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=21608 NMB_RS07690 WP_002225089.1 1528598..1529059(+) (recX) [Neisseria meningitidis MC58]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACATCCGGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGCTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACATGCCTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9JYQ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

94.771

100

0.948

Multiple sequence alignment