Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   CU118_RS06225 Genome accession   NZ_CP024998
Coordinates   1248449..1249723 (+) Length   424 a.a.
NCBI ID   WP_054190131.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 55-99-44     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1243449..1254723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CU118_RS06205 (CU118_06205) - 1244774..1244869 (+) 96 WP_054190127.1 hypothetical protein -
  CU118_RS06210 (CU118_06210) - 1244830..1245960 (-) 1131 WP_054190128.1 HAD family hydrolase -
  CU118_RS06215 (CU118_06215) nagE 1246067..1247533 (-) 1467 WP_054190129.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  CU118_RS06220 (CU118_06220) - 1247660..1248277 (-) 618 WP_054190130.1 lysophospholipid acyltransferase family protein -
  CU118_RS06225 (CU118_06225) htrA 1248449..1249723 (+) 1275 WP_054190131.1 S1C family serine protease Regulator
  CU118_RS06230 (CU118_06230) tyrS 1249817..1251079 (-) 1263 WP_054190132.1 tyrosine--tRNA ligase -
  CU118_RS06235 (CU118_06235) - 1251460..1252365 (+) 906 WP_054190133.1 transglycosylase domain-containing protein -
  CU118_RS06240 (CU118_06240) - 1252345..1252437 (-) 93 WP_031761401.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45747.90 Da        Isoelectric Point: 9.8964

>NTDB_id=216014 CU118_RS06225 WP_054190131.1 1248449..1249723(+) (htrA) [Staphylococcus aureus strain 55-99-44]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYIAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=216014 CU118_RS06225 WP_054190131.1 1248449..1249723(+) (htrA) [Staphylococcus aureus strain 55-99-44]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAAACAACAAATAATAAAGGCGGCAATCAATTAGACGGGCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTAATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGTGTAGGTTCAGGTGTCATCTATCAAATAAACA
ATAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGATGCTGAGACAACTGGTGGTAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCTGGTAACTCAGGCGGCGCATTAGTAGATATAAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATATCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGCCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.557

94.811

0.366


Multiple sequence alignment