Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   CVT30_RS10180 Genome accession   NZ_CP024989
Coordinates   2434158..2434934 (+) Length   258 a.a.
NCBI ID   WP_045561107.1    Uniprot ID   A0A927LAP1
Organism   Streptomyces sp. AMCC400023     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2429158..2439934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVT30_RS10165 (CVT30_10340) - 2429325..2429858 (+) 534 WP_045561104.1 TerD family protein -
  CVT30_RS10170 (CVT30_10345) - 2430005..2432896 (-) 2892 WP_045561105.1 vitamin B12-dependent ribonucleotide reductase -
  CVT30_RS10175 (CVT30_10350) nrdR 2433056..2433619 (-) 564 WP_237313186.1 transcriptional regulator NrdR -
  CVT30_RS10180 (CVT30_10355) dinR/lexA 2434158..2434934 (+) 777 WP_045561107.1 transcriptional repressor LexA Regulator
  CVT30_RS10185 (CVT30_10360) - 2435123..2437135 (-) 2013 WP_045561108.1 ATP-dependent DNA helicase -
  CVT30_RS10190 (CVT30_10365) - 2437458..2438195 (-) 738 WP_193381281.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27920.61 Da        Isoelectric Point: 7.0666

>NTDB_id=215882 CVT30_RS10180 WP_045561107.1 2434158..2434934(+) (dinR/lexA) [Streptomyces sp. AMCC400023]
MTTTADSATITAQDRSQSRLEPVHAMNEATNHEGPKRALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQASAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEPI
PGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=215882 CVT30_RS10180 WP_045561107.1 2434158..2434934(+) (dinR/lexA) [Streptomyces sp. AMCC400023]
GTGACCACCACCGCTGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCACGAACCATGAAGGGCCCAAGCGCGCCCTGCCCGGCCGACCTCCAGGCATCAGGGCGGACAGCTCCGGGCTCA
CCGATCGGCAGCGCCGGGTCATCGAGGTGATCAGGGACTCGGTGCAGCGGCGCGGATACCCGCCGTCGATGCGGGAGATC
GGCCAGGCGGTCGGCCTGTCCAGCACATCCTCCGTGGCGCACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGTCCGCGTGCGTACGAGGTCCGCGGCTCCGACCAGGCCTCGGCCCAGCCGACGGACACGGCGGGCAAGC
CGGCCGCTTCCTACGTGCCGCTCGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCCGTGGAGGATGTG
TTCCCACTCCCCCGCCAGCTGGTGGGTGACGGCGAGCTCTTCGTCCTCAAGGTCGTCGGTGATTCCATGATCGAGGCGGC
GATCTGTGACGGTGACTGGGTGACGGTCCGCCGCCAGCCCGTCGCGGAGAACGGGGACATCGTGGCCGCCATGCTGGACG
GCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTGCTCCCGCACAACGCCGCCTATGAGCCCATC
CCGGGTGACGACGCGACCATCCTCGGCAAGGTGGTGGCCGTGCTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A927LAP1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.19

81.395

0.376