Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BWI95_RS13645 Genome accession   NZ_CP019445
Coordinates   2905937..2906557 (+) Length   206 a.a.
NCBI ID   WP_054803149.1    Uniprot ID   A0A807LKA2
Organism   Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2900937..2911557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWI95_RS13620 (BWI95_13620) - 2901327..2903072 (-) 1746 WP_054803113.1 AAA family ATPase -
  BWI95_RS13625 (BWI95_13625) matP 2903255..2903707 (+) 453 WP_023481810.1 macrodomain Ter protein MatP -
  BWI95_RS13630 (BWI95_13630) ompA 2903794..2904843 (-) 1050 WP_023481315.1 porin OmpA -
  BWI95_RS13640 (BWI95_13640) sulA 2905211..2905720 (-) 510 WP_076769644.1 SOS-induced cell division inhibitor SulA -
  BWI95_RS13645 (BWI95_13645) sxy/tfoX 2905937..2906557 (+) 621 WP_054803149.1 TfoX/Sxy family DNA transformation protein Regulator
  BWI95_RS13650 (BWI95_13650) yccS 2906554..2908680 (-) 2127 WP_076769645.1 YccS family putative transporter -
  BWI95_RS13655 (BWI95_13655) - 2908696..2909142 (-) 447 WP_054803114.1 YccF domain-containing protein -
  BWI95_RS13660 (BWI95_13660) helD 2909265..2911319 (+) 2055 WP_076769646.1 DNA helicase IV -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23462.18 Da        Isoelectric Point: 10.2311

>NTDB_id=215848 BWI95_RS13645 WP_054803149.1 2905937..2906557(+) (sxy/tfoX) [Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76]
MEDLSYQRIYQSREYLTSLGQISHRAHFGGYSLAVDNIVFAMIAEGKLYLRACDESAQYDVVRRAPLLSLNKRGRQISLN
YFYVSDNVWGDRGLLLKLSTLALDAARREKTQREKLFRLRDLPNLSSQLEFQLQQAGIKDAQILRLLGAKVCWLRLRKMN
KQLSVKVLFALEGAIVGIHEAALPASRRQALLEWSNDVINKGANPL

Nucleotide


Download         Length: 621 bp        

>NTDB_id=215848 BWI95_RS13645 WP_054803149.1 2905937..2906557(+) (sxy/tfoX) [Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76]
ATGGAAGACCTATCTTATCAACGGATATATCAATCGCGCGAATATCTCACTTCACTCGGACAAATTAGCCATCGCGCCCA
CTTTGGTGGTTATAGCCTTGCAGTGGATAACATCGTTTTTGCGATGATAGCCGAGGGGAAACTCTACTTACGCGCCTGTG
ATGAAAGCGCGCAGTATGACGTCGTCCGGCGTGCACCGCTTTTAAGTCTCAACAAGCGGGGGCGTCAGATATCGTTAAAT
TATTTTTATGTCAGCGACAATGTATGGGGTGACCGCGGCTTGCTGCTGAAGCTTTCTACACTTGCGCTTGATGCAGCACG
GCGGGAGAAAACACAGCGCGAAAAACTTTTTCGCCTGCGCGATCTACCCAATCTTTCCAGTCAACTCGAGTTTCAATTGC
AGCAGGCCGGCATCAAAGATGCGCAAATCCTGCGGCTACTTGGTGCGAAAGTTTGCTGGCTCAGACTTCGGAAAATGAAT
AAACAACTCAGTGTAAAAGTGTTATTTGCACTGGAAGGGGCCATCGTCGGCATTCATGAAGCAGCGCTTCCGGCAAGTCG
TCGCCAGGCGCTGCTTGAGTGGTCTAATGATGTGATCAATAAAGGAGCTAACCCTCTCTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(118-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A807LKA2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

52.683

99.515

0.524

Multiple sequence alignment