Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CVO91_RS06435 Genome accession   NZ_CP024974
Coordinates   1267401..1268066 (-) Length   221 a.a.
NCBI ID   WP_002943246.1    Uniprot ID   -
Organism   Streptococcus suis strain CZ130302     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1262401..1273066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS06405 (CVO91_06405) - 1262506..1263139 (+) 634 Protein_1188 DUF3307 domain-containing protein -
  CVO91_RS06410 (CVO91_06410) - 1263288..1263482 (+) 195 WP_002943228.1 hypothetical protein -
  CVO91_RS06420 (CVO91_06420) xerS 1263745..1264815 (+) 1071 WP_002943231.1 tyrosine recombinase XerS Machinery gene
  CVO91_RS06425 (CVO91_06425) - 1264878..1266386 (-) 1509 WP_002943240.1 phosphoglucomutase -
  CVO91_RS06430 (CVO91_06430) - 1266463..1267404 (-) 942 WP_002943243.1 sensor histidine kinase -
  CVO91_RS06435 (CVO91_06435) braR 1267401..1268066 (-) 666 WP_002943246.1 response regulator transcription factor Regulator
  CVO91_RS06440 (CVO91_06440) - 1268108..1268374 (-) 267 WP_002943249.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CVO91_RS06445 (CVO91_06445) - 1268358..1268609 (-) 252 WP_002943256.1 DUF6290 family protein -
  CVO91_RS06450 (CVO91_06450) - 1268702..1270672 (-) 1971 WP_002943273.1 FtsX-like permease family protein -
  CVO91_RS06455 (CVO91_06455) - 1270673..1271425 (-) 753 WP_002943274.1 ABC transporter ATP-binding protein -
  CVO91_RS06460 (CVO91_06460) - 1271561..1272295 (-) 735 WP_002943275.1 ABC transporter permease -
  CVO91_RS06465 (CVO91_06465) - 1272297..1273043 (-) 747 WP_002943276.1 ABC transporter permease -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25419.17 Da        Isoelectric Point: 4.7792

>NTDB_id=215825 CVO91_RS06435 WP_002943246.1 1267401..1268066(-) (braR) [Streptococcus suis strain CZ130302]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSDLSIDQFQLSLDGRFSNESEQVQLSPTETKILS
ALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=215825 CVO91_RS06435 WP_002943246.1 1267401..1268066(-) (braR) [Streptococcus suis strain CZ130302]
ATGAAAAAAGAGAAGATTTATATTGTTGAAGACGATGAGATGATTGTCCAACTCTTGAAGCAACACCTGGGCAAATCTTA
TCAGGTGGAAAGCGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCTGAAATCAAACCAGACTTGGTGCTAATGGACA
TTAGCCTGCCTTATTACAACGGCTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCC
TCTAGCGATGATGAGATGAATGCAGTTATGGCTATGAACATGGGTGGCGATGATTTTGTGTCAAAGCCTTTTTCACTGGG
AATTTTGGATGCCAAAATCGGTGCCTTCCTGCGTCGGGTTAATCAATTCAGCAAATCGAGCGATTTGTCTATCGACCAGT
TCCAGCTTAGTTTGGACGGGCGATTTTCAAACGAATCGGAACAGGTTCAACTTTCACCTACGGAAACCAAGATTTTGTCC
GCCTTGCTAGAAAGACAAGGGCAGATTGTCAGCAAGGAAGAACTTTTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
CCAGAACACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAGGTCGGTTTTGAACGTATCCATACGGTTC
GTGGTGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)

Response regulator receiver domain (Response_reg)

(6-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.548

0.471