Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CVO91_RS02985 Genome accession   NZ_CP024974
Coordinates   543167..543943 (+) Length   258 a.a.
NCBI ID   WP_004195626.1    Uniprot ID   -
Organism   Streptococcus suis strain CZ130302     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 538167..548943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS02975 (CVO91_02975) - 540123..541343 (-) 1221 WP_100664750.1 ISL3 family transposase -
  CVO91_RS02980 (CVO91_02980) rlmD 541777..543129 (-) 1353 WP_004195625.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  CVO91_RS02985 (CVO91_02985) recX 543167..543943 (+) 777 WP_004195626.1 recombination regulator RecX Regulator
  CVO91_RS02990 (CVO91_02990) - 544210..545373 (-) 1164 WP_100664735.1 IS30 family transposase -
  CVO91_RS02995 (CVO91_02995) - 545570..546103 (+) 534 WP_002942711.1 DUF402 domain-containing protein -
  CVO91_RS03000 (CVO91_03000) - 546161..546478 (+) 318 WP_002942715.1 DUF960 domain-containing protein -
  CVO91_RS03005 (CVO91_03005) - 546578..547309 (+) 732 WP_002942716.1 GntR family transcriptional regulator -
  CVO91_RS03010 (CVO91_03010) - 547484..548740 (-) 1257 WP_100664751.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30514.12 Da        Isoelectric Point: 9.6051

>NTDB_id=215801 CVO91_RS02985 WP_004195626.1 543167..543943(+) (recX) [Streptococcus suis strain CZ130302]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKLLIDKRLAEEDFSELARKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDALIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYR

Nucleotide


Download         Length: 777 bp        

>NTDB_id=215801 CVO91_RS02985 WP_004195626.1 543167..543943(+) (recX) [Streptococcus suis strain CZ130302]
ATGAGAATTACAAAAATTGAAAAAAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATTGTGACGGTATTAGAGGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACTGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGGTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGCCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGCCTTAATTGCCA
AGGAACTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTA
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCGGTAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368