Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   BW721_RS05225 Genome accession   NZ_CP019433
Coordinates   1068687..1070501 (-) Length   604 a.a.
NCBI ID   WP_076766800.1    Uniprot ID   A0A1U7EBW1
Organism   Jeotgalibaca sp. PTS2502     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1063687..1075501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BW721_RS05200 (BW721_05200) - 1064207..1065166 (-) 960 WP_198031408.1 NAD(P)-dependent oxidoreductase -
  BW721_RS05205 (BW721_05205) - 1065187..1065993 (-) 807 WP_076766792.1 NAD kinase -
  BW721_RS05210 (BW721_05210) - 1066006..1066647 (-) 642 WP_076766794.1 GTP pyrophosphokinase family protein -
  BW721_RS05215 (BW721_05215) - 1066806..1067399 (+) 594 WP_076766796.1 CYTH domain-containing protein -
  BW721_RS05220 (BW721_05220) - 1067663..1068358 (+) 696 WP_076766798.1 DsbA family protein -
  BW721_RS05225 (BW721_05225) pepF 1068687..1070501 (-) 1815 WP_076766800.1 oligoendopeptidase F Regulator
  BW721_RS05230 (BW721_05230) - 1070577..1071641 (-) 1065 WP_076766802.1 competence protein CoiA family protein -
  BW721_RS05235 (BW721_05235) - 1071712..1072131 (-) 420 WP_076766805.1 HIT family protein -
  BW721_RS05240 (BW721_05240) - 1072341..1072982 (-) 642 WP_076766807.1 adaptor protein MecA -
  BW721_RS05245 (BW721_05245) - 1073203..1074318 (-) 1116 WP_076766809.1 lactate oxidase -
  BW721_RS05250 (BW721_05250) - 1074353..1075060 (-) 708 WP_076766811.1 LrgB family protein -
  BW721_RS05255 (BW721_05255) - 1075053..1075448 (-) 396 WP_076766813.1 CidA/LrgA family protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 69004.93 Da        Isoelectric Point: 4.6194

>NTDB_id=215789 BW721_RS05225 WP_076766800.1 1068687..1070501(-) (pepF) [Jeotgalibaca sp. PTS2502]
MSEVKQLSKRHELAEETTWDLSAIFESDAVFEKELEEITELAKEVKALQGTVGESSQALLTAIEAILTVNQKLERAYVYS
HLKNDQDTANSTYQTLHDKAVAVLTQVNEASSWFNPEVLAIPEETLNTYEVENEGLNAYRHMLEELTSQRDHVLSAREEE
LLAGAAEIFSGASRTFSILNNADIEFPTVKDEEGNDVKLSHGLYGKLIESSNREVREQAYKALYKTYDGLKNTFATTLGT
HVKAHNYQAKVRHFPSARAAALANNNIPESVYDTLLDVVNKNLPLLHRYVALRKKLLNVDELYMYDMYTPLTGEAPIKYN
IEEAKEKTLDSLQPLGDDYQRILNEAFDNRWIDWYENEGKRSGAYSSGAYDTNPYILMNWQDSLNQLYTLVHELGHSVHS
YYTRHNQPYAYGDYSIFLAEIASTTNENILTDYLLKTQTDPKVRIYVLNHYLDGFKGTVFRQTQFAEFENYIHQQAQAGV
PLTQDLLTDYYGNLNARYYGPAVERDDQIALEWSRIPHFYYNHYVYQYSTGFSAATALAKKIIDGEEGALDKYITYLKSG
SSDYPIEVMKKAGVDMTKSAYIEDAMKVFEERLNELEALIEAEL

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=215789 BW721_RS05225 WP_076766800.1 1068687..1070501(-) (pepF) [Jeotgalibaca sp. PTS2502]
ATGTCAGAAGTTAAACAATTATCAAAACGTCATGAATTAGCTGAAGAAACAACATGGGATTTAAGTGCCATTTTTGAATC
TGACGCGGTTTTTGAAAAAGAATTAGAAGAAATAACAGAGCTTGCTAAGGAAGTGAAGGCTCTTCAAGGAACGGTTGGGG
AAAGTAGCCAAGCTTTATTAACGGCTATTGAAGCGATCTTAACGGTTAACCAAAAACTTGAGCGTGCTTACGTTTACTCT
CATTTAAAAAATGACCAAGATACAGCTAATAGTACTTACCAAACCTTGCATGACAAAGCAGTTGCAGTGTTGACGCAAGT
GAATGAAGCAAGTTCATGGTTTAATCCAGAAGTATTGGCTATTCCAGAAGAGACATTGAACACTTATGAGGTAGAAAATG
AAGGGTTGAATGCTTATCGTCATATGCTGGAAGAATTAACCTCTCAACGTGATCATGTGCTGTCTGCAAGAGAAGAAGAA
TTACTAGCTGGAGCCGCTGAAATTTTCTCAGGTGCTAGCCGTACATTCTCTATTTTAAATAATGCTGATATTGAGTTTCC
AACTGTTAAAGACGAAGAGGGCAATGATGTGAAATTGTCTCATGGTCTATACGGTAAGTTAATTGAAAGTTCAAACCGTG
AAGTCCGTGAACAAGCCTATAAAGCCTTATATAAAACATACGATGGCTTGAAAAATACGTTTGCAACAACTTTAGGAACT
CACGTTAAAGCGCACAACTATCAAGCTAAGGTTCGTCATTTCCCGTCTGCTCGTGCAGCAGCATTGGCAAACAATAACAT
TCCCGAAAGTGTTTACGATACACTATTAGATGTTGTGAATAAAAATCTGCCGTTGTTGCATCGTTATGTGGCATTGCGTA
AGAAATTATTGAATGTGGATGAGTTATATATGTATGACATGTATACGCCACTAACAGGGGAAGCGCCAATCAAGTACAAT
ATTGAAGAAGCGAAAGAAAAAACTTTGGACTCGTTACAACCACTAGGTGATGATTACCAACGTATTTTGAATGAAGCCTT
TGATAACCGTTGGATTGACTGGTATGAAAATGAAGGAAAACGCTCAGGTGCGTATTCTTCTGGTGCCTACGATACAAATC
CATACATTTTGATGAACTGGCAAGATTCATTAAATCAATTGTATACATTGGTTCATGAGCTTGGTCATAGCGTTCACAGC
TACTATACACGTCATAACCAACCGTATGCTTATGGGGATTATTCTATTTTCCTAGCTGAGATTGCATCAACAACTAACGA
AAATATTTTAACGGACTATTTGTTAAAAACACAAACAGATCCAAAAGTACGTATTTATGTATTGAACCATTACTTAGATG
GCTTCAAAGGAACTGTTTTTCGTCAAACACAGTTTGCTGAGTTTGAGAATTATATTCACCAACAAGCACAAGCAGGCGTA
CCGTTGACACAAGATTTATTAACAGACTATTACGGTAACTTAAATGCACGTTACTATGGTCCAGCAGTAGAACGTGATGA
CCAAATTGCTCTAGAGTGGTCACGTATCCCTCACTTCTACTACAACCACTATGTGTACCAATACTCAACAGGATTCTCTG
CAGCAACAGCATTAGCTAAGAAAATCATTGATGGAGAAGAGGGTGCGCTAGACAAGTATATTACTTACTTGAAATCTGGT
AGCAGCGATTACCCAATCGAAGTGATGAAAAAAGCTGGCGTGGATATGACGAAATCGGCTTATATTGAAGATGCTATGAA
AGTCTTTGAAGAGCGTCTAAACGAGCTAGAAGCGTTAATTGAAGCGGAACTGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(117-186)

Peptidase family M3 (Peptidase_M3)

(207-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1U7EBW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

54.054

98.013

0.53

Multiple sequence alignment