Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PspS35_RS27945 Genome accession   NZ_CP019431
Coordinates   6173341..6173748 (-) Length   135 a.a.
NCBI ID   WP_159937636.1    Uniprot ID   A0A6I6W1S8
Organism   Pseudomonas sp. S35     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6168341..6178748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PspS35_RS27930 (PspS35_28090) - 6170356..6172395 (-) 2040 WP_159937634.1 methyl-accepting chemotaxis protein -
  PspS35_RS27935 (PspS35_28095) - 6172392..6172916 (-) 525 WP_159937635.1 chemotaxis protein CheW -
  PspS35_RS27940 (PspS35_28100) pilH 6172929..6173294 (-) 366 WP_003234583.1 twitching motility response regulator PilH -
  PspS35_RS27945 (PspS35_28105) pilG 6173341..6173748 (-) 408 WP_159937636.1 twitching motility response regulator PilG Regulator
  PspS35_RS27950 (PspS35_28110) gshB 6173988..6174941 (+) 954 WP_159937637.1 glutathione synthase -
  PspS35_RS27955 (PspS35_28115) - 6175019..6175924 (+) 906 WP_159937638.1 energy transducer TonB -
  PspS35_RS27960 (PspS35_28120) - 6176031..6176600 (+) 570 WP_159937639.1 YqgE/AlgH family protein -
  PspS35_RS27965 (PspS35_28125) ruvX 6176600..6177037 (+) 438 WP_003176676.1 Holliday junction resolvase RuvX -
  PspS35_RS27970 (PspS35_28130) pyrR 6177205..6177711 (+) 507 WP_159937640.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PspS35_RS27975 (PspS35_28135) - 6177736..6178740 (+) 1005 WP_159937641.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14920.43 Da        Isoelectric Point: 7.3843

>NTDB_id=215738 PspS35_RS27945 WP_159937636.1 6173341..6173748(-) (pilG) [Pseudomonas sp. S35]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=215738 PspS35_RS27945 WP_159937636.1 6173341..6173748(-) (pilG) [Pseudomonas sp. S35]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGACTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACGTCGGGTGCGAAGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTTGATCACCACCCGCACA
TTATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACTTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATTCCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCAATCAAGGCCTATGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I6W1S8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659

Multiple sequence alignment