Detailed information NTG0215622

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: CV702_RS06070
• Genome accession: NZ_CP024954
• Coordinates: 1283952..1285022 (-)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis subsp. lactis strain F44
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1278952..1290022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV702_RS06055 (CV702_06060)	dprA	1279250..1280098 (+)	849	WP_012897825.1	DNA-processing protein DprA	Machinery gene
CV702_RS06060 (CV702_06065)	topA	1280360..1282492 (+)	2133	WP_017864498.1	type I DNA topoisomerase	-
CV702_RS06065 (CV702_06070)	trmFO	1282564..1283907 (+)	1344	WP_017864499.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
CV702_RS06070 (CV702_06075)	xerS	1283952..1285022 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
CV702_RS06075 (CV702_06080)	-	1285507..1285794 (-)	288	WP_017864500.1	hypothetical protein	-
CV702_RS06080 (CV702_06085)	xerS	1285878..1286933 (-)	1056	WP_017864501.1	tyrosine recombinase XerS	Machinery gene
CV702_RS06085 (CV702_06095)	-	1287714..1288223 (+)	510	WP_017864502.1	hypothetical protein	-
CV702_RS06090 (CV702_06100)	-	1288338..1288685 (-)	348	WP_017864503.1	helix-turn-helix transcriptional regulator	-
CV702_RS06095 (CV702_06105)	-	1289003..1289200 (+)	198	WP_017864504.1	hypothetical protein	-
CV702_RS12120 (CV702_06110)	-	1289288..1289560 (-)	273	WP_306471740.1	hypothetical protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=215622 CV702_RS06070 WP_003131037.1 1283952..1285022(-) (xerS) [Lactococcus lactis subsp. lactis strain F44]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=215622 CV702_RS06070 WP_003131037.1 1283952..1285022(-) (xerS) [Lactococcus lactis subsp. lactis strain F44]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767