Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   BWZ32_RS15540 Genome accession   NZ_CP019320
Coordinates   3101269..3101787 (-) Length   172 a.a.
NCBI ID   WP_011079537.1    Uniprot ID   Q7MHS7
Organism   Vibrio vulnificus strain VV2014DJH     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3096269..3106787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWZ32_RS15515 (BWZ32_15400) rimM 3096337..3096885 (-) 549 WP_011079542.1 ribosome maturation factor RimM -
  BWZ32_RS15520 (BWZ32_15405) rpsP 3096901..3097149 (-) 249 WP_011079541.1 30S ribosomal protein S16 -
  BWZ32_RS15525 (BWZ32_15410) ffh 3097431..3098807 (-) 1377 WP_011079540.1 signal recognition particle protein -
  BWZ32_RS15530 (BWZ32_15415) - 3099021..3099815 (+) 795 WP_011079539.1 cytochrome C assembly family protein -
  BWZ32_RS15535 (BWZ32_15420) - 3099902..3101179 (+) 1278 WP_011079538.1 HlyC/CorC family transporter -
  BWZ32_RS15540 (BWZ32_15425) luxS 3101269..3101787 (-) 519 WP_011079537.1 S-ribosylhomocysteine lyase Regulator
  BWZ32_RS15545 (BWZ32_15430) - 3101838..3102443 (-) 606 WP_418388780.1 hypothetical protein -
  BWZ32_RS15550 (BWZ32_15435) gshA 3102481..3104046 (-) 1566 WP_045618628.1 glutamate--cysteine ligase -

Sequence

Protein


Download         Length: 172 a.a.        Molecular weight: 18899.69 Da        Isoelectric Point: 5.2384

>NTDB_id=214841 BWZ32_RS15540 WP_011079537.1 3101269..3101787(-) (luxS) [Vibrio vulnificus strain VV2014DJH]
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRKHLNGASVEIIDISP
MGCRTGFYMSLIGAPSEQDVASAWTASMEDVLKVESQNKIPELNEYQCGTAAMHSLDEAKQIAQNILAAGISVNKNDELA
LPEAMLKELKVD

Nucleotide


Download         Length: 519 bp        

>NTDB_id=214841 BWZ32_RS15540 WP_011079537.1 3101269..3101787(-) (luxS) [Vibrio vulnificus strain VV2014DJH]
ATGCCATTATTAGATAGTTTTACCGTTGACCACACTCGCATGCATGCACCAGCGGTGCGTGTGGCAAAAACCATGCAGAC
GCCAAAAGGCGACACCATTACCGTGTTTGACTTACGTTTCACTGCACCTAACAAAGATATTTTGTCAGAGAAAGGCATTC
ACACGTTAGAGCACCTGTACGCAGGCTTTATGCGTAAGCATCTTAATGGCGCATCGGTTGAGATCATCGATATCTCACCG
ATGGGTTGTCGCACCGGTTTCTACATGAGCTTAATTGGTGCGCCGAGTGAGCAAGACGTGGCATCTGCGTGGACGGCTTC
GATGGAAGATGTGTTGAAAGTGGAAAGCCAAAACAAGATCCCTGAGTTGAACGAGTATCAGTGTGGTACCGCGGCCATGC
ACTCGCTAGATGAAGCGAAGCAAATCGCGCAGAACATTCTGGCAGCAGGAATTTCGGTGAATAAAAATGATGAACTGGCA
TTGCCAGAAGCGATGTTGAAAGAGCTCAAAGTGGATTAA

Domains

Predicted by InterproScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-154)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q7MHS7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

87.135

99.419

0.866

Multiple sequence alignment