Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   BWZ32_RS06975 Genome accession   NZ_CP019320
Coordinates   1448699..1450099 (+) Length   466 a.a.
NCBI ID   WP_011149911.1    Uniprot ID   A0AAN1PPC9
Organism   Vibrio vulnificus strain VV2014DJH     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443699..1455099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWZ32_RS06950 (BWZ32_06945) rsxB 1444337..1444933 (-) 597 WP_101956823.1 electron transport complex subunit RsxB -
  BWZ32_RS06955 (BWZ32_06950) rsxA 1444935..1445513 (-) 579 WP_011080895.1 electron transport complex subunit RsxA -
  BWZ32_RS06965 (BWZ32_06960) - 1446111..1446296 (+) 186 WP_011080894.1 hypothetical protein -
  BWZ32_RS06970 (BWZ32_06965) uvrB 1446395..1448425 (+) 2031 WP_011080893.1 excinuclease ABC subunit UvrB -
  BWZ32_RS06975 (BWZ32_06970) luxO 1448699..1450099 (+) 1401 WP_011149911.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  BWZ32_RS06980 (BWZ32_06975) luxU 1450099..1450446 (+) 348 WP_011080891.1 quorum-sensing phosphorelay protein LuxU -
  BWZ32_RS06985 (BWZ32_06980) - 1450547..1451437 (-) 891 WP_011080890.1 YvcK family protein -
  BWZ32_RS06990 (BWZ32_06985) moaA 1451753..1452742 (+) 990 WP_101957373.1 GTP 3',8-cyclase MoaA -
  BWZ32_RS06995 (BWZ32_06990) moaB 1452823..1453335 (+) 513 WP_011080888.1 molybdenum cofactor biosynthesis protein B -
  BWZ32_RS07000 (BWZ32_06995) moaC 1453346..1453825 (+) 480 WP_011080887.1 cyclic pyranopterin monophosphate synthase MoaC -
  BWZ32_RS07005 (BWZ32_07000) moaD 1453822..1454067 (+) 246 WP_011080886.1 molybdopterin synthase sulfur carrier subunit -
  BWZ32_RS07010 (BWZ32_07005) moaE 1454069..1454524 (+) 456 WP_101956824.1 molybdopterin synthase catalytic subunit MoaE -

Sequence

Protein


Download         Length: 466 a.a.        Molecular weight: 52120.68 Da        Isoelectric Point: 6.2540

>NTDB_id=214828 BWZ32_RS06975 WP_011149911.1 1448699..1450099(+) (luxO) [Vibrio vulnificus strain VV2014DJH]
MQQITTTKQRYLLMVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLHAVKASHP
DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKASKLKNDADSAGSQNYQGFIGSSQKMQQVYRTI
DSAASSKASIFITGESGTGKEVCAEAIHAASRRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGG
TLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRER
GEDVIEIAYSLLGYMSHEEGKNFVRFSQPVIDRFNEYEWPGNVRQLQNVLRNVVVLNNGKEITMEMLPPPLNQPFERKES
VQPDLSELISVRDICPLWLTEKLAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQAWNEKEEKQKA

Nucleotide


Download         Length: 1401 bp        

>NTDB_id=214828 BWZ32_RS06975 WP_011149911.1 1448699..1450099(+) (luxO) [Vibrio vulnificus strain VV2014DJH]
ATGCAACAAATAACGACAACGAAACAGCGTTACTTGCTGATGGTAGAAGACACCGCTTCTGTCGCAGCCCTCTATCGCTC
CTATCTCATGCCATTGGGTATCGATATCAATATCGTGGGTACTGGACGTGACGCGATAGACAGTCTAAAACATCGCATTC
CAGATCTTATTCTGCTGGATTTACGTCTACCGGACATGACGGGAATGGACGTATTGCATGCAGTGAAAGCAAGTCACCCT
GATGTTCCTATCATTTTCATGACCGCACACGGCTCGATCGATACTGCCGTTGAAGCAATGCGACATGGGTCTCAGGATTT
TCTTATCAAGCCATGCGAAGCGGATCGCTTGAGGGTCACGGTAAACAACGCTATCCGCAAAGCGAGTAAATTGAAGAATG
ATGCGGACAGTGCAGGCAGCCAAAATTATCAAGGCTTTATCGGCAGTAGCCAAAAAATGCAGCAGGTTTATCGCACCATT
GACTCCGCGGCGAGCAGTAAAGCAAGCATCTTTATCACAGGTGAAAGTGGTACAGGTAAAGAGGTGTGCGCAGAAGCCAT
TCATGCGGCCAGTCGACGTGGAGACAAGCCATTTATCGCGATTAACTGTGCTGCAATTCCCAAGGATTTGATTGAAAGCG
AGCTATTTGGTCATGTCAAAGGTGCGTTTACCGGCGCTGCGACCGATCGCCAAGGGGCGGCAGAGCTCGCTGATGGGGGC
ACACTTTTCCTGGATGAGTTGTGTGAAATGGACCTGGATCTGCAAACAAAATTGCTGCGTTTTATCCAAACGGGTACTTT
CCAAAAAGTAGGCTCTTCGAAAATGAAGAGTGTTGACGTGCGTTTTGTGTGCGCGACAAACCGAGACCCCTGGAAAGAGG
TACAAGAAGGGCGCTTTCGTGAAGATTTGTACTACCGACTTTATGTGATTCCACTGCACTTGCCACCACTTCGTGAACGT
GGAGAGGATGTCATCGAGATCGCTTACTCGTTACTGGGTTACATGTCACACGAGGAAGGGAAAAACTTTGTTCGTTTCTC
TCAACCTGTGATAGATAGATTTAACGAATATGAGTGGCCAGGTAATGTGCGTCAGTTACAAAATGTGCTGCGTAATGTCG
TGGTTCTTAACAACGGTAAAGAGATTACCATGGAGATGCTGCCGCCTCCTTTGAACCAGCCCTTTGAACGCAAAGAAAGT
GTGCAGCCTGATCTGAGTGAGTTGATTTCCGTCAGGGATATTTGTCCATTGTGGTTGACAGAGAAACTGGCGATTGAACA
AGCGATCAAAGCGTGTGATGGTAACATTCCGAGAGCCGCTGGCTATCTGGATGTCAGCCCGTCAACGATTTATCGCAAGT
TACAGGCGTGGAACGAAAAAGAAGAAAAACAGAAAGCATAA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(417-457)

Response regulator receiver domain (Response_reg)

(13-121)

Sigma-54 interaction domain (Sigma54_activat)

(147-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

85.714

96.137

0.824

Multiple sequence alignment