Detailed information NTG0021469

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SP_RS02895
• Genome accession: NC_003028
• Coordinates: 553572..553838 (+)
• Length: 88 a.a.
• NCBI ID: WP_001808618.1
• Uniprot ID: A0A0E9GZQ4
• Organism: Streptococcus pneumoniae TIGR4
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	553031..553255	553572..553838	flank	317

Gene organization within MGE regions

Location: 553031..553838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP_RS11855 (SP_0583)	-	553031..553446 (+)	416	Protein_547	helix-turn-helix domain-containing protein	-
SP_RS02895 (SP_0584)	HI0659	553572..553838 (+)	267	WP_001808618.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9622.15 Da
• Isoelectric Point: 4.4893

>NTDB_id=21469 SP_RS02895 WP_001808618.1 553572..553838(+) (HI0659) [Streptococcus pneumoniae TIGR4]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=21469 SP_RS02895 WP_001808618.1 553572..553838(+) (HI0659) [Streptococcus pneumoniae TIGR4]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

3D structure

• AlphaFold DB: A0A0E9GZQ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	61.039	87.5	0.534